| Autor: |
Hyun-Jeong Lee, Mi Jang, Hyeongmin Kim, Woori Kwak, Woncheoul Park, Jae Yeon Hwang, Chang-Kyu Lee, Gul Won Jang, Mi Na Park, Hyeong-Cheol Kim, Jin Young Jeong, Kang Seok Seo, Heebal Kim, Seoae Cho, Bo-Young Lee |
| Jazyk: |
angličtina |
| Rok vydání: |
2013 |
| Předmět: |
|
| Zdroj: |
PLoS ONE, Vol 8, Iss 6, p e66267 (2013) |
| Druh dokumentu: |
article |
| ISSN: |
1932-6203 |
| DOI: |
10.1371/journal.pone.0066267 |
| Popis: |
Adipocytes mainly function as energy storage and endocrine cells. Adipose tissues showed the biological and genetic difference based on their depots. The difference of adipocytes between depots might be influenced by the inherent genetic programing for adipogenesis. We used RNA-seq technique to investigate the transcriptomes in 3 adipose tissues of omental (O), subcutaneous (S) and intramuscular (I) fats in cattle. Sequence reads were obtained from Illumina HiSeq2000 and mapped to the bovine genome using Tophat2. Differentially expressed genes (DEG) between adipose tissues were detected by EdgeR. We identified 5797, 2156, and 5455 DEGs in the comparison between OI, OS, and IS respectively and also found 5657 DEGs in the comparison between the intramuscular and the combined omental and subcutaneous fats (C) (FDR |
| Databáze: |
Directory of Open Access Journals |
| Externí odkaz: |
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