In silico models of the macromolecular NaV1.5-KIR2.1 complex

Autor: Anna Stary-Weinzinger
Jazyk: angličtina
Rok vydání: 2024
Předmět:
Zdroj: Frontiers in Physiology, Vol 15 (2024)
Druh dokumentu: article
ISSN: 1664-042X
DOI: 10.3389/fphys.2024.1362964
Popis: In cardiac cells, the expression of the cardiac voltage-gated Na+ channel (NaV1.5) is reciprocally regulated with the inward rectifying K+ channel (KIR2.1). These channels can form macromolecular complexes that pre-assemble early during forward trafficking (transport to the cell membrane). In this study, we present in silico 3D models of NaV1.5-KIR2.1, generated by rigid-body protein-protein docking programs and deep learning-based AlphaFold-Multimer software. Modeling revealed that the two channels could physically interact with each other along the entire transmembrane region. Structural mapping of disease-associated mutations revealed a hotspot at this interface with several trafficking-deficient variants in close proximity. Thus, examining the role of disease-causing variants is important not only in isolated channels but also in the context of macromolecular complexes. These findings may contribute to a better understanding of the life-threatening cardiovascular diseases underlying KIR2.1 and NaV1.5 malfunctions.
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