| Autor: |
Hao Zhou, Xunhe Huang, Jiajia Liu, Jinmei Ding, Ke Xu, Wenqi Zhu, Chuan He, Lingyu Yang, Jianshen Zhu, Chengxiao Han, Chao Qin, Huaixi Luo, Kangchun Chen, Shengyao Jiang, Yurou Shi, Jinyuan Zeng, Zhuoxian Weng, Yongjie Xu, Qing Wang, Ming Zhong, Bingwang Du, Sen Song, He Meng |
| Jazyk: |
angličtina |
| Rok vydání: |
2024 |
| Předmět: |
|
| Zdroj: |
Scientific Data, Vol 11, Iss 1, Pp 1-8 (2024) |
| Druh dokumentu: |
article |
| ISSN: |
2052-4463 |
| DOI: |
10.1038/s41597-024-02991-0 |
| Popis: |
Abstract The Alectoris Chukar (chukar) is the most geographically widespread partridge species in the world, demonstrating exceptional adaptability to diverse ecological environments. However, the scarcity of genetic resources for chukar has hindered research into its adaptive evolution and molecular breeding. In this study, we have sequenced and assembled a high-quality, phased chukar genome that consists of 31 pairs of relatively complete diploid chromosomes. Our BUSCO analysis reported a high completeness score of 96.8% and 96.5%, with respect to universal single-copy orthologs and a low duplication rate (0.3% and 0.5%) for two assemblies. Through resequencing and population genomic analyses of six subspecies, we have curated invaluable genotype data that underscores the adaptive evolution of chukar in response to both arid and high-altitude environments. These data will significantly contribute to research on how chukars adaptively evolve to cope with desertification and alpine climates. |
| Databáze: |
Directory of Open Access Journals |
| Externí odkaz: |
|
Full text from SpringerLink