Complete chloroplast genome of Prunus fasciculata (Rosaceae), a species native to western North America
| Autor: | Yue-Ling Li, James Reed, Yu-Qian Xu, Da-Hao Qu, Zhong-Shuai Sun |
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| Jazyk: | angličtina |
| Rok vydání: | 2021 |
| Předmět: | |
| Zdroj: | Mitochondrial DNA. Part B. Resources, Vol 6, Iss 2, Pp 480-482 (2021) |
| Druh dokumentu: | article |
| ISSN: | 2380-2359 23802359 |
| DOI: | 10.1080/23802359.2021.1872439 |
| Popis: | Prunus fasciculata is a wild species of Prunus native to western North America. Here, we reported the complete chloroplast (cp) genome of P. fasciculata (GenBank accession number: MW160273). The cp genome was 157,986 bp long, with a large single-copy (LSC) region of 86,068 bp and a small single-copy (SSC) region of 19,166 bp separated by a pair of inverted repeats (IRs) of 26,376 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and eight ribosomal RNA genes. We also reconstructed the phylogeny of Prunus sensu lato using maximum-likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis confirmed the sister group relationship between P. fasciculata and the remaining subg. Prunus. |
| Databáze: | Directory of Open Access Journals |
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