Transcriptome Profile Reveals Genetic and Metabolic Mechanisms Related to Essential Fatty Acid Content of Intramuscular Longissimus thoracis in Nellore Cattle

Autor: Gustavo Pimenta Schettini, Elisa Peripolli, Pâmela Almeida Alexandre, Wellington Bizarria dos Santos, Angélica Simone Cravo Pereira, Lúcia Galvão de Albuquerque, Fernando Baldi, Rogério Abdallah Curi
Jazyk: angličtina
Rok vydání: 2022
Předmět:
Zdroj: Metabolites, Vol 12, Iss 5, p 471 (2022)
Druh dokumentu: article
ISSN: 2218-1989
DOI: 10.3390/metabo12050471
Popis: Beef is a source of essential fatty acids (EFA), linoleic (LA) and alpha-linolenic (ALA) acids, which protect against inflammatory and cardiovascular diseases in humans. However, the intramuscular EFA profile in cattle is a complex and polygenic trait. Thus, this study aimed to identify potential regulatory genes of the essential fatty acid profile in Longissimus thoracis of Nellore cattle finished in feedlot. Forty-four young bulls clustered in four groups of fifteen animals with extreme values for each FA were evaluated through differentially expressed genes (DEG) analysis and two co-expression methodologies (WGCNA and PCIT). We highlight the ECHS1, IVD, ASB5, and ERLIN1 genes and the TF NFIA, indicated in both FA. Moreover, we associate the NFYA, NFYB, PPARG, FASN, and FADS2 genes with LA, and the RORA and ELOVL5 genes with ALA. Furthermore, the functional enrichment analysis points out several terms related to FA metabolism. These findings contribute to our understanding of the genetic mechanisms underlying the beef EFA profile in Nellore cattle finished in feedlot.
Databáze: Directory of Open Access Journals