The Epidemiological Characteristics of the Korean Bat Paramyxovirus between 2016 and 2019

Autor: Seong Sik Jang, Ji Yeong Noh, Van Thi Lo, Yong Gun Choi, Sun-Woo Yoon, Dae Gwin Jeong, Hye Kwon Kim
Jazyk: angličtina
Rok vydání: 2020
Předmět:
Zdroj: Microorganisms, Vol 8, Iss 6, p 844 (2020)
Druh dokumentu: article
ISSN: 2076-2607
DOI: 10.3390/microorganisms8060844
Popis: Bats are considered reservoirs of severe emerging human pathogens. Notably, bats host major mammalian paramyxoviruses from the family Paramyxoviridae, order Mononegavirales. In this study, paramyxoviruses were investigated by reverse transcription semi-nested polymerase chain reaction (RT-semi-nested PCR) and reverse transcription polymerase chain reaction (RT-PCR), based on the RT-semi-nested PCR using the consensus paramyxovirus primers targeting the RNA dependent-RNA-polymerase (RdRp) region. In addition, RT-PCR was performed using newly designed primers targeting regions of the fusion protein (F) and hemagglutinin-neuraminidase (HN). The dominant bat species in the collection site of paramyxoviruses were Miniopterus schreibersii, Myotis macrodactylus, Myotis petax, and Rhinolophus ferrumequinum. Paramyxoviruses were detected in four samples in 2016 and six in 2019. Meanwhile, in samples collected in 2017 and 2018, no paramyxoviruses were detected. Phylogenetic analysis based on the partial nucleotide sequences of RdRp, F, and HN proteins suggested that the viruses belonged to the proposed genus Shaanvirus. In conclusion, this study revealed that bat paramyxoviruses in Korea belonged to a single genus and circulated sporadically in several provinces, including Chungbuk, Gangwon, Jeju, and Jeonnam.
Databáze: Directory of Open Access Journals