Intramolecular dynamics of dsDNA confined to a quasi-one-dimensional nanochannel

Autor: Indresh Yadav, William Rosencrans, Rajib Basak, Jeroen A. van Kan, Johan R. C. van der Maarel
Jazyk: angličtina
Rok vydání: 2020
Předmět:
Zdroj: Physical Review Research, Vol 2, Iss 1, p 013294 (2020)
Druh dokumentu: article
ISSN: 2643-1564
DOI: 10.1103/PhysRevResearch.2.013294
Popis: The intramolecular dynamics of double-stranded DNA confined to a long, straight, and rectangular channel with a cross-sectional diameter of 125 nm (two times the persistence length) is measured with fluorescence microscopy. The derived intermediate dynamic structure factors show predominant odd modes associated with end-to-end fluctuation and typical stretched exponential relaxation behavior pertaining to Rouse dynamics. Major confinement-induced slowing down of intramolecular fluctuation is observed, which may have important implications in biology and biotechnology. As predicted for free-draining in a quasi-one-dimensional conformation, the Rouse times show a cube rather than the classical, blob model predicted square dependence on the molecular weight.
Databáze: Directory of Open Access Journals