Air pollution from livestock farms and the oropharyngeal microbiome of COPD patients and controls

Autor: Warner van Kersen, Alex Bossers, Wouter A.A. de Steenhuijsen Piters, Myrna M.T. de Rooij, Marc Bonten, Ad C. Fluit, Dick Heederik, Fernanda L. Paganelli, Malbert Rogers, Marco Viveen, Debby Bogaert, Helen L. Leavis, Lidwien A.M. Smit
Jazyk: angličtina
Rok vydání: 2022
Předmět:
Zdroj: Environment International, Vol 169, Iss , Pp 107497- (2022)
Druh dokumentu: article
ISSN: 0160-4120
DOI: 10.1016/j.envint.2022.107497
Popis: Air pollution from livestock farms is known to affect respiratory health of patients with chronic obstructive pulmonary disease (COPD). The mechanisms behind this relationship, however, remain poorly understood. We hypothesise that air pollutants could influence respiratory health through modulation of the airway microbiome. Therefore, we studied associations between air pollution exposure and the oropharyngeal microbiota (OPM) composition of COPD patients and controls in a livestock-dense area.Oropharyngeal swabs were collected from 99 community-based (mostly mild) COPD cases and 184 controls (baseline), and after 6 and 12 weeks. Participants were non-smokers or former smokers. Annual average livestock-related outdoor air pollution at the home address was predicted using dispersion modelling. OPM composition was analysed using 16S rRNA-based sequencing in all baseline samples and 6-week and 12-week repeated samples of 20 randomly selected subjects (n = 323 samples). A random selection of negative control swabs, taken every sampling day, were also included in the downstream analysis.Both farm-emitted endotoxin and PM10 levels were associated with increased OPM richness in COPD patients (p 0.05). However, members of the genus Streptococcus were more abundant in COPD patients (Benjamini-Hochberg adjusted p
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