OligoM-Cancer: A multidimensional information platform for deep phenotyping of heterogenous oligometastatic cancer

Autor: Rongrong Wu, Hui Zong, Weizhe Feng, Ke Zhang, Jiakun Li, Erman Wu, Tong Tang, Chaoying Zhan, Xingyun Liu, Yi Zhou, Chi Zhang, Yingbo Zhang, Mengqiao He, Shumin Ren, Bairong Shen
Jazyk: angličtina
Rok vydání: 2024
Předmět:
Zdroj: Computational and Structural Biotechnology Journal, Vol 24, Iss , Pp 561-570 (2024)
Druh dokumentu: article
ISSN: 2001-0370
DOI: 10.1016/j.csbj.2024.08.015
Popis: Patients with oligometastatic cancer (OMC) exhibit better response to local therapeutic interventions and a more treatable tendency than those with polymetastatic cancers. However, studies on OMC are limited and lack effective integration for systematic comparison and personalized application, and the diagnosis and precise treatment of OMC remain controversial. The application of large language models in medicine remains challenging because of the requirement of high-quality medical data. Moreover, these models must be enhanced using precise domain-specific knowledge. Therefore, we developed the OligoM-Cancer platform (http://oligo.sysbio.org.cn), pioneering knowledge curation that depicts various aspects of oligometastases spectrum, including markers, diagnosis, prognosis, and therapy choices. A user-friendly website was developed using HTML, FLASK, MySQL, Bootstrap, Echarts, and JavaScript. This platform encompasses comprehensive knowledge and evidence of phenotypes and their associated factors. With 4059 items of literature retrieved, OligoM-Cancer includes 1345 valid publications and 393 OMC-associated factors. Additionally, the included clinical assistance tools enhance the interpretability and credibility of clinical translational practice. OligoM-Cancer facilitates knowledge-guided modeling for deep phenotyping of OMC and potentially assists large language models in supporting specialised oligometastasis applications, thereby enhancing their generalization and reliability.
Databáze: Directory of Open Access Journals