An integrative multi-omics approach to characterize interactions between tuberculosis and diabetes mellitus

Autor: Caian L. Vinhaes, Eduardo R. Fukutani, Gabriel C. Santana, María B. Arriaga, Beatriz Barreto-Duarte, Mariana Araújo-Pereira, Mateus Maggiti-Bezerril, Alice M.S. Andrade, Marina C. Figueiredo, Ginger L. Milne, Valeria C. Rolla, Afrânio L. Kristki, Marcelo Cordeiro-Santos, Timothy R. Sterling, Bruno B. Andrade, Artur T.L. Queiroz
Jazyk: angličtina
Rok vydání: 2024
Předmět:
Zdroj: iScience, Vol 27, Iss 3, Pp 109135- (2024)
Druh dokumentu: article
ISSN: 2589-0042
DOI: 10.1016/j.isci.2024.109135
Popis: Summary: Tuberculosis-diabetes mellitus (TB-DM) is linked to a distinct inflammatory profile, which can be assessed using multi-omics analyses. Here, a machine learning algorithm was applied to multi-platform data, including cytokines and gene expression in peripheral blood and eicosanoids in urine, in a Brazilian multi-center TB cohort. There were four clinical groups: TB-DM(n = 24), TB only(n = 28), DM(HbA1c ≥ 6.5%) only(n = 11), and a control group of close TB contacts who did not have TB or DM(n = 13). After cross-validation, baseline expression or abundance of MMP-28, LTE-4, 11-dTxB2, PGDM, FBXO6, SECTM1, and LINCO2009 differentiated the four patient groups. A distinct multi-omic-derived, dimensionally reduced, signature was associated with TB, regardless of glycemic status. SECTM1 and FBXO6 mRNA levels were positively correlated with sputum acid-fast bacilli grade in TB-DM. Values of the biomarkers decreased during the course of anti-TB therapy. Our study identified several markers associated with the pathophysiology of TB-DM that could be evaluated in future mechanistic investigations.
Databáze: Directory of Open Access Journals