Transcriptomic landscape of blood platelets in healthy donors

Autor: Anna Supernat, Marta Popęda, Krzysztof Pastuszak, Myron G. Best, Peter Grešner, Sjors In ’t Veld, Bartłomiej Siek, Natalia Bednarz-Knoll, Matthew T. Rondina, Tomasz Stokowy, Thomas Wurdinger, Jacek Jassem, Anna J. Żaczek
Jazyk: angličtina
Rok vydání: 2021
Předmět:
Zdroj: Scientific Reports, Vol 11, Iss 1, Pp 1-10 (2021)
Druh dokumentu: article
ISSN: 2045-2322
DOI: 10.1038/s41598-021-94003-z
Popis: Abstract Blood platelet RNA-sequencing is increasingly used among the scientific community. Aberrant platelet transcriptome is common in cancer or cardiovascular disease, but reference data on platelet RNA content in healthy individuals are scarce and merit complex investigation. We sought to explore the dynamics of platelet transcriptome. Datasets from 204 healthy donors were used for the analysis of splice variants, particularly with regard to age, sex, blood storage time, unit of collection or library size. Genes B2M, PPBP, TMSB4X, ACTB, FTL, CLU, PF4, F13A1, GNAS, SPARC, PTMA, TAGLN2, OAZ1 and OST4 demonstrated the highest expression in the analysed cohort, remaining substantial transcription consistency. CSF3R gene was found upregulated in males (fold change 2.10, FDR q
Databáze: Directory of Open Access Journals