Association of the mycobacterial interspersed repetitive unit with drug resistance in mycobacterium tuberculosis

Autor: Xian-feng eCheng, Chao eJiang, Ming eZhang, Dan eXia, Li-li eChu, Yu-feng eWen, Ming eZhu, Yue-gen eJiang
Jazyk: angličtina
Rok vydání: 2016
Předmět:
Zdroj: Frontiers in Microbiology, Vol 7 (2016)
Druh dokumentu: article
ISSN: 1664-302X
DOI: 10.3389/fmicb.2016.00378
Popis: BackgroundRecently, Mycobacterial Interspersed Repetitive Unit (MIRU) was supposed to be associated with drug resistance in M.tuberculosis (MTB). However, whether the MIRU was related to drug resistance actually was still unknown. This research was conducted to explore that association.MethodsDrug susceptibility testing was used to evaluate the drug resistance of five anti-tuberculosis drug (isoniazid, INH; rifampicin, RFP; streptomycin, SM; ethambutol, EMB; and Paminosalicylicacid, PAS.). We tested the number of the repeat unite of MIRU (Mycobacterial Interspersed Repetitive Unit) locus based on PCR of miru-vntr genotyping. Then, through logistic regression, we evaluated the association between fifteen MIRU and the resistance. In addition, we explored the most suitable MIRU locus of identified MIRU loci for drug resistance through multivariate logistic regression.ResultsAmong these fifteen MIRU, we found several MIRU loci could predict the drug resistance well. For example ,ETRB and ETRC could predict INH resistance; MIRU20 was associated with EMB resistance; and QUB11a was a predictive factor of PSA. ConclusionOur results may provide candidate regions for future genetic studies and aid in the prediction for drug resistance of MTB.
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