Development of PCR-RFLP Technique for Identify Several Members of Species Complex and Species Complex
| Autor: | Syafiqa Pramunadipta, Ani Widiastuti, Arif Wibowo, Haruhisa Suga, Achmadi Priyatmojo |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2022 |
| Předmět: | |
| Zdroj: | The Plant Pathology Journal, Vol 38, Iss 3, Pp 254-260 (2022) |
| Druh dokumentu: | article |
| ISSN: | 1598-2254 2093-9280 |
| DOI: | 10.5423/PPJ.NT.12.2021.0184 |
| Popis: | Fusarium incarnatum-equiseti species complex (FIESC) contain over 40 members. The primer pair Smibo1FM/Semi1RM on the RPB2 partial gene has been reported to be able to identify Fusarium semitectum. The F. fujikuroi species complex (FFSC) contains more than 50 members. The F. verticillioides as a member of this complex can be identified by using VER1/VER2 primer pair on the CaM partial gene. In this research, the Smibo1FM/Semi1RM can amplify F. sulawesiense, F. hainanense, F. bubalinum, and F. tanahbumbuense, members of FIESC at 424 bp. The VER1/VER2 can amplify F. verticillioides, F. andiyazi, and F. pseudocircinatum, members of FFSC at 578 bp. Polymerase chain reaction-restriction fragment length polymorphism by using the combination of three restriction enzymes EcoRV, MspI, and HpyAV can differentiate each species of FIESC used. The two restriction enzymes HpaII and NspI can distinguish each species of FFSC used. The proper identification process is required for pathogen control in the field in order to reduce crop yield loss. |
| Databáze: | Directory of Open Access Journals |
| Externí odkaz: |
|