Covid-19 Dynamic Monitoring and Real-Time Spatio-Temporal Forecasting

Autor: Cecilia Cordeiro da Silva, Clarisse Lins de Lima, Ana Clara Gomes da Silva, Eduardo Luiz Silva, Gabriel Souza Marques, Lucas Job Brito de Araújo, Luiz Antônio Albuquerque Júnior, Samuel Barbosa Jatobá de Souza, Maíra Araújo de Santana, Juliana Carneiro Gomes, Valter Augusto de Freitas Barbosa, Anwar Musah, Patty Kostkova, Wellington Pinheiro dos Santos, Abel Guilhermino da Silva Filho
Jazyk: angličtina
Rok vydání: 2021
Předmět:
Zdroj: Frontiers in Public Health, Vol 9 (2021)
Druh dokumentu: article
ISSN: 2296-2565
42938082
DOI: 10.3389/fpubh.2021.641253
Popis: Background: Periodically, humanity is often faced with new and emerging viruses that can be a significant global threat. It has already been over a century post—the Spanish Flu pandemic, and we are witnessing a new type of coronavirus, the SARS-CoV-2, which is responsible for Covid-19. It emerged from the city of Wuhan (China) in December 2019, and within a few months, the virus propagated itself globally now resulting more than 50 million cases with over 1 million deaths. The high infection rates coupled with dynamic population movement demands for tools, especially within a Brazilian context, that will support health managers to develop policies for controlling and combating the new virus.Methods: In this work, we propose a tool for real-time spatio-temporal analysis using a machine learning approach. The COVID-SGIS system brings together routinely collected health data on Covid-19 distributed across public health systems in Brazil, as well as taking to under consideration the geographic and time-dependent features of Covid-19 so as to make spatio-temporal predictions. The data are sub-divided by federative unit and municipality. In our case study, we made spatio-temporal predictions of the distribution of cases and deaths in Brazil and in each federative unit. Four regression methods were investigated: linear regression, support vector machines (polynomial kernels and RBF), multilayer perceptrons, and random forests. We use the percentage RMSE and the correlation coefficient as quality metrics.Results: For qualitative evaluation, we made spatio-temporal predictions for the period from 25 to 27 May 2020. Considering qualitatively and quantitatively the case of the State of Pernambuco and Brazil as a whole, linear regression presented the best prediction results (thematic maps with good data distribution, correlation coefficient >0.99 and RMSE (%)
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