Transcriptomic response is more sensitive to water deficit in shoots than roots of Vitis riparia (Michx.)

Autor: Vedbar Singh Khadka, Kimberley Vaughn, Juan Xie, Padmapriya Swaminathan, Qin Ma, Grant R. Cramer, Anne Y. Fennell
Jazyk: angličtina
Rok vydání: 2019
Předmět:
Zdroj: BMC Plant Biology, Vol 19, Iss 1, Pp 1-20 (2019)
Druh dokumentu: article
ISSN: 1471-2229
DOI: 10.1186/s12870-019-1664-7
Popis: Abstract Background Drought is an important constraint on grapevine sustainability. Vitis riparia, widely used in rootstock and scion breeding, has been studied in isolated leaf drying response studies; however, it is essential to identify key root and shoot water deficit signaling traits in intact plants. This information will aid improved scion and rootstock selection and management practices in grapevine. RNAseq data were generated from V. riparia roots and shoots under water deficit and well-watered conditions to determine root signaling and shoot responses to water deficit. Results Shoot elongation, photosynthetic rate, and stomatal conductance were significantly reduced in water deficit (WD) treated than in well-watered grapevines. RNAseq analysis indicated greater transcriptional differences in shoots than in roots under WD, with 6925 and 1395 genes differentially expressed, respectively (q-value
Databáze: Directory of Open Access Journals
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