Genetic variation of HvXYN1 associated with endoxylanase activity and TAX content in barley (Hordeum vulgare L.)

Autor: Xueli Lu, Yunxia Fang, Bin Tian, Tao Tong, Jiahui Wang, Hua Wang, Shengguan Cai, Jiang Hu, Dali Zeng, Heng Xu, Xiaoqin Zhang, Dawei Xue
Jazyk: angličtina
Rok vydání: 2019
Předmět:
Zdroj: BMC Plant Biology, Vol 19, Iss 1, Pp 1-13 (2019)
Druh dokumentu: article
ISSN: 1471-2229
DOI: 10.1186/s12870-019-1747-5
Popis: Abstract Background Endo-β-1,4-xylanase1 (EA), the key endoxylanase in plants, is involved in the degradation of arabinoxylan during grain germination. In barley (Hordeum vulgare L.), one gene (HvXYN-1) that encode a endo-beta-1,4-xylanase, has been cloned. However, the single nucleotide polymorphisms (SNPs) that affect the endoxylanase activity and total arabinoxylan (TAX) content have yet to be characterized. The investigation of genetic variation in HvXYN1 may facilitate a better understanding of the relationship between TAX content and EA activity in barley. Results In the current study, 56 polymorphisms were detected in HvXYN1 among 210 barley accessions collected from 34 countries, with 10 distinct haplotypes identified. The SNPs at positions 110, 305, 1045, 1417, 1504, 1597, 1880 bp in the genomic region of HvXYN1 were significantly associated with EA activity (P
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