Mini-review: Gene regulatory network benefits from three-dimensional chromatin conformation and structural biology

Autor: Xiusheng Zhu, Qitong Huang, Jing Luo, Dashuai Kong, Yubo Zhang
Jazyk: angličtina
Rok vydání: 2023
Předmět:
Zdroj: Computational and Structural Biotechnology Journal, Vol 21, Iss , Pp 1728-1737 (2023)
Druh dokumentu: article
ISSN: 2001-0370
DOI: 10.1016/j.csbj.2023.02.028
Popis: Gene regulatory networks are now at the forefront of precision biology, which can help researchers better understand how genes and regulatory elements interact to control cellular gene expression, offering a more promising molecular mechanism in biological research. Interactions between the genes and regulatory elements involve different promoters, enhancers, transcription factors, silencers, insulators, and long-range regulatory elements, which occur at a ∼10 µm nucleus in a spatiotemporal manner. In this way, three-dimensional chromatin conformation and structural biology are critical for interpreting the biological effects and the gene regulatory networks. In the review, we have briefly summarized the latest processes in three-dimensional chromatin conformation, microscopic imaging, and bioinformatics, and we have presented the outlook and future directions for these three aspects.
Databáze: Directory of Open Access Journals