| Autor: |
Juan J. Roda-Garcia, Jose M. Haro-Moreno, Lukas A. Huschet, Francisco Rodriguez-Valera, Mario López-Pérez |
| Jazyk: |
angličtina |
| Rok vydání: |
2021 |
| Předmět: |
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| Zdroj: |
mSystems, Vol 6, Iss 5 (2021) |
| Druh dokumentu: |
article |
| ISSN: |
2379-5077 |
| DOI: |
10.1128/msystems.00944-21 |
| Popis: |
ABSTRACT The SAR116 clade within the class Alphaproteobacteria represents one of the most abundant groups of heterotrophic bacteria inhabiting the surface of the ocean. The small number of cultured representatives of SAR116 (only two to date) is a major bottleneck that has prevented an in-depth study at the genomic level to understand the relationship between genome diversity and its role in the marine environment. In this study, we use all publicly available genomes to provide a genomic overview of the phylogeny, metabolism, and biogeography within the SAR116 clade. This increased genomic diversity has led to the discovery of two subclades that, despite coexisting in the same environment, display different properties in their genomic makeup. One represents a novel subclade for which no pure cultures have been isolated and is composed mainly of single-amplified genomes (SAGs). Genomes within this subclade showed convergent evolutionary trajectories with more streamlined features, such as low GC content (ca. 30%), short intergenic spacers ( |
| Databáze: |
Directory of Open Access Journals |
| Externí odkaz: |
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