Complete chloroplast genome sequence and phylogenetic analysis of Ilex viridis Champ. ex Benth
| Autor: | Zhenyu Shan, Biyao Zhou, Yao Li, Daosen Liu, Wei Li, Julin Ma, Tao Su |
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| Jazyk: | angličtina |
| Rok vydání: | 2020 |
| Předmět: | |
| Zdroj: | Mitochondrial DNA. Part B. Resources, Vol 5, Iss 1, Pp 914-915 (2020) |
| Druh dokumentu: | article |
| ISSN: | 2380-2359 23802359 |
| DOI: | 10.1080/23802359.2020.1719913 |
| Popis: | Ilex viridis Champ. ex Benth. is domestic to southern China. In the present work, the complete chloroplast (cp) genome sequence of Ilex viridis was assembled and characterized by high-throughput sequencing analyses. The chloroplast genome was 157,701 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 87,177 bp and 18,394 bp, respectively, which were separated by a pair of 26,065 bp inverted repeat (IR) regions. The genome was predicted to contain 134 genes, including 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 37.7%. The phylogenetic tree reconstructed using 13 chloroplast genomes reveals that I. viridis is mostly related to Ilex szechwanensis. |
| Databáze: | Directory of Open Access Journals |
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