Genome-wide identification and characterization of NBLRR genes in finger millet (Eleusine coracana L.) and their expression in response to Magnaporthe grisea infection

Autor: Alexander Balamurugan, Mallana Gowdra Mallikarjuna, Shilpi Bansal, S. Chandra Nayaka, Hosahatti Rajashekara, Tara Satyavathi Chellapilla, Ganesan Prakash
Jazyk: angličtina
Rok vydání: 2024
Předmět:
Zdroj: BMC Plant Biology, Vol 24, Iss 1, Pp 1-18 (2024)
Druh dokumentu: article
ISSN: 1471-2229
DOI: 10.1186/s12870-024-04743-z
Popis: Abstract Background The nucleotide binding site leucine rich repeat (NBLRR) genes significantly regulate defences against phytopathogens in plants. The genome-wide identification and analysis of NBLRR genes have been performed in several species. However, the detailed evolution, structure, expression of NBLRRs and functional response to Magnaporthe grisea are unknown in finger millet (Eleusine coracana (L.) Gaertn.). Results The genome-wide scanning of the finger millet genome resulted in 116 NBLRR (EcNBLRRs1-116) encompassing 64 CC-NB-LRR, 47 NB-LRR and 5 CCR-NB-LRR types. The evolutionary studies among the NBLRRs of five Gramineae species, viz., purple false brome (Brachypodium distachyon (L.) P.Beauv.), finger millet (E. coracana), rice (Oryza sativa L.), sorghum (Sorghum bicolor L. (Moench)) and foxtail millet (Setaria italica (L.) P.Beauv.) showed the evolution of NBLRRs in the ancestral lineage of the target species and subsequent divergence through gene-loss events. The purifying selection (Ka/Ks
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