Versatile Quality Control Methods for Nanopore Sequencing

Autor:	Davide Bolognini, Roberto Semeraro, Alberto Magi
Jazyk:	angličtina
Rok vydání:	2019
Předmět:	Evolution QH359-425
Zdroj:	Evolutionary Bioinformatics, Vol 15 (2019)
Druh dokumentu:	article
ISSN:	1176-9343 11769343
DOI:	10.1177/1176934319863068
Popis:	Third-generation sequencing using nanopores as biosensors has recently emerged as a strategy capable to overcome next-generation sequencing drawbacks and pitfalls. Assessing the quality of the data produced by nanopore sequencing platforms is essential to decide how useful these may be in making biological discoveries. Here, we briefly contextualized NanoR, a quality control method for nanopore sequencing data we developed, in the scenario of preexistent similar tools. We also illustrated 2 quality control pipelines, readily applicable to nanopore sequencing data, respectively, based on NanoR and PyPore, a second quality control method published by our group.
Databáze:	Directory of Open Access Journals
Externí odkaz:	https://doaj.org/article/054ea6b0af97492281928c14e102ff62 Zobrazit plný text záznamu View record in DOAJ Plný text ve formátu PDF Plný text ve formátu HTML
Nepřihlášeným uživatelům se plný text nezobrazuje	K zobrazení výsledku je třeba se přihlásit.