Comparison of different automatic solutions for resection cavity segmentation in postoperative MRI volumes including longitudinal acquisitions

Autor: Canalini, Luca, Klein, Jan, de Barros, Nuno Pedrosa, Sima, Diana Maria, Miller, Dorothea, Hahn, Horst
Rok vydání: 2022
Předmět:
Zdroj: SPIE Proceedings Vol. 11598 - Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling
Druh dokumentu: Working Paper
DOI: 10.1117/12.2580889
Popis: In this work, we compare five deep learning solutions to automatically segment the resection cavity in postoperative MRI. The proposed methods are based on the same 3D U-Net architecture. We use a dataset of postoperative MRI volumes, each including four MRI sequences and the ground truth of the corresponding resection cavity. Four solutions are trained with a different MRI sequence. Besides, a method designed with all the available sequences is also presented. Our experiments show that the method trained only with the T1 weighted contrast-enhanced MRI sequence achieves the best results, with a median DICE index of 0.81.
Databáze: arXiv