Faster Longest Common Extension Queries in Strings over General Alphabets
| Autor: | Gawrychowski, Paweł, Kociumaka, Tomasz, Rytter, Wojciech, Waleń, Tomasz |
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| Rok vydání: | 2016 |
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| Druh dokumentu: | Working Paper |
| Popis: | Longest common extension queries (often called longest common prefix queries) constitute a fundamental building block in multiple string algorithms, for example computing runs and approximate pattern matching. We show that a sequence of $q$ LCE queries for a string of size $n$ over a general ordered alphabet can be realized in $O(q \log \log n+n\log^*n)$ time making only $O(q+n)$ symbol comparisons. Consequently, all runs in a string over a general ordered alphabet can be computed in $O(n \log \log n)$ time making $O(n)$ symbol comparisons. Our results improve upon a solution by Kosolobov (Information Processing Letters, 2016), who gave an algorithm with $O(n \log^{2/3} n)$ running time and conjectured that $O(n)$ time is possible. We make a significant progress towards resolving this conjecture. Our techniques extend to the case of general unordered alphabets, when the time increases to $O(q\log n + n\log^*n)$. The main tools are difference covers and the disjoint-sets data structure. Comment: Accepted to CPM 2016 |
| Databáze: | arXiv |
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