Logical Modeling and Analysis of Cellular Regulatory Networks With GINsim 3.0

Autor: Naldi, Aurélien, Hernandez, Céline, Abou-Jaoudé, Wassim, Monteiro, Pedro T., Chaouiya, Claudine, Thieffry, Denis
Jazyk: angličtina
Rok vydání: 2018
Předmět:
Zdroj: Frontiers in Physiology, Vol 9 (2018)
Frontiers in Physiology
DOI: 10.3389/fphys.2018.00646/full
Popis: The logical formalism is well adapted to model large cellular networks, in particular when detailed kinetic data are scarce. This tutorial focuses on this well-established qualitative framework. Relying on GINsim (release 3.0), a software implementing this formalism, we guide the reader step by step toward the definition, the analysis and the simulation of a four-node model of the mammalian p53-Mdm2 network.
Databáze: OpenAIRE