Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines

Autor: Grenga, Lucia, Gallais, Fabrice, Pible, Olivier, Gaillard, Jean-Charles, Gouveia, Duarte, Batina, Hélène, Bazaline, Niza, Ruat, Sylvie, Culotta, Karen, Miotello, Guylaine, Debroas, Stéphanie, Roncato, Marie-Anne, Steinmetz, Gérard, Foissard, Charlotte, Desplan, Anne, Alpha-Bazin, Béatrice, Almunia, Christine, Gas, Fabienne, Bellanger, Laurent, Armengaud, Jean
Přispěvatelé: Médicaments et Technologies pour la Santé (MTS), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), ANR-17-CE18-0023,Phylopeptidomics,Identification rapide de bactéries pathogènes et résistances aux antibiotiques(2017)
Jazyk: angličtina
Rok vydání: 2020
Předmět:
Zdroj: Emerging Microbes & Infections
Emerging microbes & infections
Emerging microbes & infections, Earliest : Springer-Nature ; Latest : Taylor & Francis, 2020, 9 (1), pp.1712-1721. ⟨10.1080/22221751.2020.1791737⟩
Emerging microbes & infections, 2020, 9 (1), pp.1712-1721. ⟨10.1080/22221751.2020.1791737⟩
article-version (VoR) Version of Record
ISSN: 2222-1751
DOI: 10.1080/22221751.2020.1791737
Popis: International audience; Severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) has resulted in a pandemic and is continuing to spread rapidly around the globe. No effective vaccine is currently available to prevent COVID-19, and intense efforts are being invested worldwide into vaccine development. In this context, all technology platforms must overcome several challenges resulting from the use of an incompletely characterized new virus. These include finding the right conditions for virus amplification for the development of vaccines based on inactivated or attenuated whole viral particles. Here, we describe a shotgun tandem mass spectrometry workflow, the data produced can be used to guide optimization of the conditions for viral amplification. In parallel, we analysed the changes occurring in the host cell proteome following SARS-CoV-2 infection to glean information on the biological processes modulated by the virus that could be further explored as potential drug targets to deal with the pandemic.
Databáze: OpenAIRE