| Autor: |
Sven, Redsun, Sam, Hokin, Connor T, Cameron, Alan M, Cleary, Joel, Berendzen, Sudhansu, Dash, Anne V, Brown, Andrew, Wilkey, Jacqueline D, Campbell, Wei, Huang, Scott R, Kalberer, Nathan T, Weeks, Steven B, Cannon, Andrew D, Farmer |
| Rok vydání: |
2022 |
| Předmět: |
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| Zdroj: |
Methods in molecular biology (Clifton, N.J.). 2443 |
| ISSN: |
1940-6029 |
| Popis: |
In this chapter, we introduce the main components of the Legume Information System ( https://legumeinfo.org ) and several associated resources. Additionally, we provide an example of their use by exploring a biological question: is there a common molecular basis, across legume species, that underlies the photoperiod-mediated transition from vegetative to reproductive development, that is, days to flowering? The Legume Information System (LIS) holds genetic and genomic data for a large number of crop and model legumes and provides a set of online bioinformatic tools designed to help biologists address questions and tasks related to legume biology. Such tasks include identifying the molecular basis of agronomic traits; identifying orthologs/syntelogs for known genes; determining gene expression patterns; accessing genomic datasets; identifying markers for breeding work; and identifying genetic similarities and differences among selected accessions. LIS integrates with other legume-focused informatics resources such as SoyBase ( https://soybase.org ), PeanutBase ( https://peanutbase.org ), and projects of the Legume Federation ( https://legumefederation.org ). |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
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