Human rotavirus genotypes detection among hospitalized children, a study in Tehran, Iran

Autor: Shahrzad, Modaress, Ali Akbar, Rahbarimanesh, Rosita, Edalat, Amir, Sohrabi, Shahab, Modarres, Hosna, Gomari, Mahdieh, Motamedirad, Ali Akbar, Sayari
Rok vydání: 2011
Předmět:
Zdroj: Archives of Iranian medicine. 14(1)
ISSN: 1735-3947
Popis: Human rotavirus genotypes G1-G4, G9, P[4] and P[8] are major worldwide causes of acute gastroenteritis in children. Rotavirus genotype G1P[8] is predominant in many countries. In this study, the genotypic diversity of group A rotaviruses were detected in children5 years of age who were treated for dehydration and diarrhea in Tehran, Iran from October 2004 to September 2008.A total of 700 stool specimens were collected from children and assessed for the presence of rotaviruses by the dsRNA-PAGE technique. G and P typing of the positive samples were performed by semi-nested multiplex RT-PCR.Rotaviruses were isolated in 19% of samples. A total of 14 rotavirus dsRNA different electrophoretypes were detected. The predominant genotype was G1 (76.3%), followed by G4 (11.5%), G8 (0.8%), P[4] (9.2%) and P[8] (66.4%), respectively. In mixed type samples, the majority were of genotype G1P[8] (53.4%), followed by G1P[4] (9.2%) and G4P[8] (4.6%). Mixed types consisted of 3.1% of the total sample followed by G1G2/-P (1.5%), G1G4P[4] (0.8%) and G1G4P[8] (0.8%).In this study, a high prevalence of the G1P[8] genotype was determined to be the cause of childhood gastroenteritis in Tehran, Iran. The sequence of G and P genotypes showed high levels of similarity to strains from other Asian countries. Our data will be useful for future vaccine formulation in Iran.
Databáze: OpenAIRE