Flow cytometry-based study of model marine microalgal consortia revealed an ecological advantage of siderophore utilization by the dinoflagellate

Autor: Ronald, Malych, Pavel, Stopka, Jan, Mach, Eva, Kotabová, Ondřej, Prášil, Robert, Sutak
Rok vydání: 2021
Předmět:
Proteomics
PetA
cytochrome b6/f

SOD1
superoxide dismutase [Cu-Zn]

ISIP
iron starvation induced protein

AtpE
ATP synthase

Iron
Marine microalgae
NPQ
nonphotochemical quenching

Siderophores
AUC
area under curve

PsaD
photosystem I reaction center subunit II

FBP1
putative ferrichrome-binding protein

LR
iron enrichment

FACS
fluorescence-activated cell sorting

LHCX
light-harvesting complex subunits

PsaC
photosystem I iron-sulfur center

Flow cytometry
NBD
nitrobenz-2-oxa-1
3-diazole

PSII
photosystem II

RR
long-term iron sufficiency

PsbV
cytochrome c-550

FBAII
fructose-bisphosphate aldolase II

PAGE
polyacrylamide gel electrophoresis

ComputingMethodologies_COMPUTERGRAPHICS
CREG1
cellular repressor of E1A stimulated genes 1

PsaE
photosystem I reaction center subunit IV

DFOB
desferrioxamine B

EDTA
ethylenediaminetetraacetic acid

ENT
enterobactin

PsbC
photosystem II CP43 reaction center protein

LL
long-term iron limitation

FBAI
fructose-bisphosphate aldolase I

PsaL
photosystem I reaction center subunit XI

BCS
bathocuproinedisulfonic acid disodium salt

PSI
photosystem I

(s)PLS-DA
(sparse) partial least squares discriminant analysis

FOB
ferrioxamine B

Amphidinium carterae
Research Article
Zdroj: Computational and Structural Biotechnology Journal
ISSN: 2001-0370
Popis: Graphical abstract
Investigations of phytoplankton responses to iron stress in seawater are complicated by the fact that iron concentrations do not necessarily reflect bioavailability. Most studies to date have been based on single species or field samples and are problematic to interpret. Here, we report results from an experimental cocultivation model system that enabled us to evaluate interspecific competition as a function of iron content and form, and to study the effect of nutritional conditions on the proteomic profiles of individual species. Our study revealed that the dinoflagellate Amphidinium carterae was able to utilize iron from a hydroxamate siderophore, a strategy that could provide an ecological advantage in environments where siderophores present an important source of iron. Additionally, proteomic analysis allowed us to identify a potential candidate protein involved in iron acquisition from hydroxamate siderophores, a strategy that is largely unknown in eukaryotic phytoplankton.
Databáze: OpenAIRE