[Study on Rotavirus detection by nucleic acid sequence based amplification]

Autor: Xiao-Xi, Kou, Qing-Ping, Wu, Hong-Ying, Fan
Rok vydání: 2006
Předmět:
Zdroj: Wei sheng wu xue bao = Acta microbiologica Sinica. 46(2)
ISSN: 0001-6209
Popis: Rotavirus is one of the major cause of the viral gastroenteritis throughout the world. A nucleic acid sequence-based amplification(NASBA) technique for the detection of rotavirus in faecal specimens was developed and compared to the RT-PCR technique. Primers were designed according to the high conserved region of VP7 gene. Amplicons were detected by denaturating agarose gel, and then demonstrated by Northern hybridization with digoxigenin-labeled oligonucleotide probe. The anticipative specific amplification product is 392bp,and no nonspecific products appear even the concentration of nontarget nucleic acid as high as 1 microg/microL. A detection limit of 50 pg target RNA/mL is obtained when the optimal amplification time of 3h used.The NASBA assay will be a favourable alternative to RT-PCR for the investigation of rotavirus outbreaks as a routine diagnostic test in the near future because it is shown to be highly sensitive, specific and do not require specialized equipment.
Databáze: OpenAIRE