Tools for microbial community analysis using high-throughput amplicon sequencing data

Autor:	Prášilová, Alžběta
Přispěvatelé:	Větrovský, Tomáš, Novotný, Marian
Jazyk:	angličtina
Rok vydání:	2022
Předmět:	microbial community analysis analýza mikrobiální komunity high-throughput sequencing massive parallel sequencing amplikonová sekvenace NGS data masivní paralelní sekvenace
Popis:	Amplicon high-throughput sequencing is currently the most widely used technique to investigate complex microbial communities. In order to analyze amplicon sequencing data, specialized software and algorithms are required to turn raw sequencing data into biologically meaningful information. This thesis serves as an overview of the current pos- sibilities and an introduction to microbial community analysis. It provides a comparison of the most widely used bioinformatics pipelines as well as a newer pipeline SEED2 and a foundation for users to make a decision based on their preferences. 1
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=od______2186::23e1b0cd2d14a520db20f5b62b83a949 http://www.nusl.cz/ntk/nusl-509699 Zobrazit plný text záznamu