Investigation of six plasmid-mediated quinolone resistance genes among clinical isolates of pseudomonas: a genotypic study in Saudi Arabia

Autor: El-Badawy,Mohamed F, Alrobaian,Majed M, Shohayeb,Mohamed M, Abdelwahab,Sayed F
Jazyk: angličtina
Rok vydání: 2019
Předmět:
Zdroj: Infection and Drug Resistance.
ISSN: 1178-6973
Popis: Mohamed F El-Badawy,1,2 Majed M Alrobaian,3 Mohamed M Shohayeb,1,4 Sayed F Abdelwahab1,51Division of Pharmaceutical Microbiology, Department of Pharmaceutics and Industrial Pharmacy, College of Pharmacy, Taif University, Taif 21974, Kingdom of Saudi Arabia; 2Department of Microbiology and Immunology, Faculty of Pharmacy, Misr University for Science and Technology, Al-Motamayez District 12568, Egypt; 3Department of Pharmaceutics and Industrial Pharmacy, College of Pharmacy, Taif University, Taif 21974, Kingdom of Saudi Arabia; 4Department of Microbiology and Biotechnology, Faculty of Pharmacy, Delta University for Science and Technology, Gamasa 35712, Egypt; 5Department of Microbiology and Immunology, Faculty of Medicine, Minia University, Minia, 61511, EgyptBackground: Quinolones are among the most effective antibiotics againstPseudomonasspp. Several chromosomal and/or plasmid-mediated quinolone-resistance mechanisms have been found inPseudomonas. Plasmid-mediated quinolone-resistance (PMQR) is mediated by quinolone-resistance (QNR) proteins, modifying enzymes or efflux pumps. Only a few previous studies examined the prevalence of quinolone-resistance in the Kingdom of Saudi Arabia (KSA) and showed it is increasing. Mechanisms of quinolone-resistance amongPseudomonasspp. in the KSA; examined herein; have not been extensively studied.Methods: Ninety-twoPseudomonasisolates were collected and their resistance to seven different types of quinolones was determined by the microbroth dilution method. PMQR mechanisms were examined using a PCR screen to identify six PMQR genes includingqnrA,qnrB,qnrD,qnrS,aac(6´)-Ib-cr, andqepA. Clonal relatedness of the quinolone-resistant isolates was determined by ERIC-PCR.Results: Of the isolates, 42.4% (39/92) were resistant to 1-7 of the tested quinolones. Gemifloxacin resistance was the lowest (28.3%) while resistance to the other six quinolones were ≥ 35%. The most common biotype among the 39 quinolone-resistant isolates was resistance to the seven tested quinolones (26/39; 66.7%).qnrD,qnrS, andaac(6´)-Ib-crwere found in 31 (79.5%), 31 (79.5%) and 28 (71.8%) of the 39 isolates, respectively, and all three genes together were found in 22 of the 39 isolates (56.4%).qnrA, qnrB, andqepAwere not detected in any of the isolates and two isolates did not harbor any of the six tested genes. The isolates showed 38 different ERIC profiles and only two isolates (Pa16 and Pa17) had an identical profile.Conclusion: This is the first description of PMQR mechanisms among clinical Pseudomonas isolates from the KSA, which appears to be mainly mediated by qnrD, qnrS, and aac(6´)-Ib-cr.Keywords: aac(6´)-Ib-cr, flouoroquinolones, Pseudomonas, qepA, qnr, QRDR, quinolones, aac(6´)-Ib-cr, flouoroquinolones, qepA, KSA, qnr, QRDR, Taif
Databáze: OpenAIRE