The Global Soil Mycobiome consortium dataset for boosting fungal diversity research

Autor: Eske De Crop, Annemieke Verbeken, Cathy Sharp, Jaan Pärn, Vladimir S. Mikryukov, Karin Pritsch, R. Henrik Nilsson, Jose G. Maciá-Vicente, Vladimir G. Onipchenko, César Marín, Kassim I. Tchan, Sten Anslan, Kadri Runnel, D. Q. Dai, Isabel C. Barrio, Miklós Bálint, Joosep Sarapuu, Jacob Heilmann-Clausen, Marcela Eugenia da Silva Cáceres, Juha M. Alatalo, S. V. Dudov, Vladimir E. Fedosov, John Y. Kupagme, Irma Zettur, Andrea Rinaldi, Alessandro Saitta, Jelena Ankuda, Urmas Kõljalg, Franz Buegger, Nourou S. Yorou, Alexandre Antonelli, Brendan R. Furneaux, Daniyal Gohar, Elisabeth M. Biersma, Francis Q. Brearley, Kevin K. Newsham, Dipon Sharmah, Louis J. Lamit, Camila Duarte Ritter, Sergei Põlme, Evgeny A. Davydov, Rebeca Casique-Valdés, Geoffrey Zahn, Leho Tedersoo, W. A. Erandi Yasanthika, Inga Hiiesalu, Young Woon Lim, Adriana Corrales, Casper Nyamukondiwa, Kristel Panksep, Genevieve Gates, Darta Klavina, Boris Tamgnoue, Roberto Godoy, Talaat Ahmed, Kessy Abarenkov, Abdul Nasir Khalid, Erin K. Cameron, Meike Piepenbring, Saleh A. Al-Farraj, Rein Drenkhan, Aída-M. Vasco-Palacios, Roberto Garibay-Orijel, Joseph Djeugap Fovo, Gregory Bonito, Peter Meidl, Kalev Adamson, Kęstutis Armolaitis, Kari A. Bråthen, Ahto Agan, Malka Saba, Peter E. Mortimer, Lateef A. Adebola, Felipe E. Albornoz, Jutamart Monkai, Niloufar Hagh-Doust, Indrek Hiiesalu, Mohammad Bahram, Tarquin Netherway, Bobby P. Sulistyo, Saleh Rahimlou, Sunil Mundra, Kevin D. Hyde, Kadri Põldmaa, Terry W. Henkel, Olavi Kurina, Tomas Roslin, Nalin N. Wijayawardene, Marieka Gryzenhout, Julieta Alvarez-Manjarrez, Rasmus Puusepp, József Geml, Eveli Otsing, Marijn Bauters, Maria Tuomi
Přispěvatelé: Tedersoo L., Mikryukov V., Anslan S., Bahram M., Khalid A.N., Corrales A., Agan A., Vasco-Palacios A.-M., Saitta A., Antonelli A., Rinaldi A.C., Verbeken A., Sulistyo B.P., Tamgnoue B., Furneaux B., Ritter C.D., Nyamukondiwa C., Sharp C., Marin C., Dai D.Q., Gohar D., Sharmah D., Biersma E.M., Cameron E.K., De Crop E., Otsing E., Davydov E.A., Albornoz F.E., Brearley F.Q., Buegger F., Gates G., Zahn G., Bonito G., Hiiesalu I., Zettur I., Barrio I.C., Parn J., Heilmann-Clausen J., Ankuda J., Kupagme J.Y., Sarapuu J., Macia-Vicente J.G., Fovo J.D., Geml J., Alatalo J.M., Alvarez-Manjarrez J., Monkai J., Poldmaa K., Runnel K., Adamson K., Brathen K.A., Pritsch K., Tchan K.I., Armolaitis K., Hyde K.D., Newsham K.K., Panksep K., Adebola L.A., Lamit L.J., Saba M., da Silva Caceres M.E., Tuomi M., Gryzenhout M., Bauters M., Balint M., Wijayawardene N., Hagh-Doust N., Yorou N.S., Kurina O., Mortimer P.E., Meidl P., Nilsson R.H., Puusepp R., Casique-Valdes R., Drenkhan R., Garibay-Orijel R., Godoy R., Alfarraj S., Rahimlou S., Polme S., Dudov S.V., Mundra S., Ahmed T., Netherway T., Henkel T.W., Roslin T., Fedosov V.E., Onipchenko V.G., Yasanthika W.A.E., Lim Y.W., Piepenbring M., Klavina D., Koljalg U., Abarenkov K.
Rok vydání: 2021
Předmět:
Zdroj: Fungal Diversity, 111, 573-588
Fungal Diversity 111 (2021)
ISSN: 1878-9129
1560-2745
Popis: This version of the article has been accepted for publication, after peer review and is subject to Springer Nature’s AM terms of use, but is not the Version of Record and does not reflect post-acceptance improvements, or any corrections. The Version of Record is available online at https://doi.org/10.1007/s13225-021-00493-7. Fungi are highly important biotic components of terrestrial ecosystems, but we still have a very limited understanding about their diversity and distribution. This data article releases a global soil fungal dataset of the Global Soil Mycobiome consortium (GSMc) to boost further research in fungal diversity, biogeography and macroecology. The dataset comprises 722,682 fungal operational taxonomic units (OTUs) derived from PacBio sequencing of full-length ITS and 18S-V9 variable regions from 3200 plots in 108 countries on all continents. The plots are supplied with geographical and edaphic metadata. The OTUs are taxonomically and functionally assigned to guilds and other functional groups. The entire dataset has been corrected by excluding chimeras, index-switch artefacts and potential contamination. The dataset is more inclusive in terms of geographical breadth and phylogenetic diversity of fungi than previously published data. The GSMc dataset is available over the PlutoF repository.
Databáze: OpenAIRE
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