Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader
| Autor: | Atsushi Yamazoe, Akira Hosoyama, Nobuyuki Fujita, Yuji Nagata, Yoshiyuki Ohtsubo, Shouta Nonoyama, Fusako Kawai, Mitsuru Numata, Masataka Tsuda, Keiko Tsuchikane |
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| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
Whole genome sequencing Strain (chemistry) 030106 microbiology Sphingopyxis macrogoltabida Computational biology Polyethylene glycol Biology Genome Microbiology 03 medical and health sciences chemistry.chemical_compound 030104 developmental biology chemistry Genetics Prokaryotes Molecular Biology |
| Zdroj: | Genome Announcements |
| ISSN: | 2169-8287 |
| DOI: | 10.1128/genomea.00529-16 |
| Popis: | We determined the complete genome sequence of Sphingopyxis macrogoltabida strain 203N, a polyethylene glycol degrader. Because the PacBio assembly (285× coverage) seemed to be full of nucleotide-level mismatches, the Newbler assembly of MiSeq mate-pair and paired-end data was used for finishing and the PacBio assembly was used as a reference. The PacBio assembly carried 414 nucleotide mismatches over 5,953,153 bases of the 203N genome. |
| Databáze: | OpenAIRE |
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