Paenibacillus faecis sp. nov., isolated from human faeces
| Autor: | Dominique Clermont, Isabelle Bonne, José-Carlos Fernandez, Christian Malosse, Richard J. Wheeler, Simonetta Gribaldo, Julia Chamot-Rooke, Ivo G. Boneca, Maïté Gomard, Chantal Bizet, Sylviane Hamon |
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| Přispěvatelé: | Collection de l'Institut Pasteur (CIP), Institut Pasteur [Paris], Microscopie ultrastructurale - Ultrapole (CITECH), Biologie et Génétique de la Paroi bactérienne - Biology and Genetics of Bacterial Cell Wall (BGPB), Spectrométrie de Masse structurale et protéomique, Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris], Biologie Moléculaire du Gène chez les Extrêmophiles (BMGE), Centre de Ressources biologiques de l'Institut Pasteur - Biological Resource Center of the Institut Pasteur (CRBIP), Institut Pasteur [Paris] (IP), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS) |
| Jazyk: | angličtina |
| Rok vydání: | 2015 |
| Předmět: |
MESH: Sequence Analysis
DNA MESH: Vitamin K 2/chemistry [SDV]Life Sciences [q-bio] Diaminopimelic Acid MESH: Paenibacillus/isolation & purification MESH: Nucleic Acid Hybridization Feces chemistry.chemical_compound Cell Wall RNA Ribosomal 16S Genotype Phylogeny MESH: Phylogeny chemistry.chemical_classification Base Composition 0303 health sciences Phylogenetic tree Strain (chemistry) MESH: Feces/microbiology Fatty Acids MESH: Diaminopimelic Acid/chemistry Nucleic Acid Hybridization food and beverages Vitamin K 2 General Medicine MESH: Paenibacillus/genetics MESH: Paenibacillus/classification 6. Clean water Bacterial Typing Techniques MESH: Vitamin K 2/analogs & derivatives [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology France MESH: Fatty Acids/chemistry Paenibacillus DNA Bacterial MESH: Cell Wall/chemistry Molecular Sequence Data Peptidoglycan Biology Microbiology MESH: Bacterial Typing Techniques Cell wall 03 medical and health sciences MESH: Base Composition Humans Ecology Evolution Behavior and Systematics 030304 developmental biology MESH: Humans MESH: Molecular Sequence Data 030306 microbiology Fatty acid Sequence Analysis DNA 16S ribosomal RNA biology.organism_classification MESH: RNA Ribosomal 16S/genetics MESH: DNA Bacterial/genetics MESH: France chemistry MESH: Peptidoglycan/chemistry Bacteria |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2015, 65 (12), pp.4621-4626. ⟨10.1099/ijsem.0.000622⟩ International Journal of Systematic and Evolutionary Microbiology, 2015, 65 (12), pp.4621-4626. ⟨10.1099/ijsem.0.000622⟩ |
| ISSN: | 1466-5026 1466-5034 |
| DOI: | 10.1099/ijsem.0.000622⟩ |
| Popis: | A spore-forming, rod-shaped Gram-strain-positive bacterium, strain 656.84T, was isolated from human faeces in 1984. It contained anteiso-C15 : 0 as the major cellular fatty acid, meso-diaminopimelic acid was found in the cell wall peptidoglycan, the polar lipid profile consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and aminophospholipids as the major components, and the predominant menaquinone was MK-7. The DNA G+C content was 52.9 mol%. The results of comparative 16S rRNA gene sequence studies placed strain 656.84T within the genus Paenibacillus. Its closest phylogenetic relatives were Paenibacillus barengoltzii and Paenibacillus timonensis. Levels of DNA–DNA relatedness between strain 656.84T and Paenibacillus timonensis CIP 108005T and Paenibacillus barengoltzii CIP 109354T were 17.3 % and 36.8 %, respectively, indicating that strain 656.84T represents a distinct species. On the basis of phenotypic and genotypic results, strain 656.84T is considered to represent a novel species within the genus Paenibacillus, for which the name Paenibacillus faecis sp. nov. is proposed; the type strain is 656.84T ( = DSM 23593T = CIP 101062T). |
| Databáze: | OpenAIRE |
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