Streptomyces xinjiangensis sp. nov., an actinomycete isolated from Lop Nur region
| Autor: | Xiao Chu, Deng Di An, Mipeshwaree Devi Asem, Cong Cheng, Xiao-Han Shi, Chun-Yan Lu, Yu-Qian Li, Wen-Jun Li, Wan-Qin Zhang |
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| Rok vydání: | 2016 |
| Předmět: |
DNA
Bacterial 0301 basic medicine China 030106 microbiology Streptomyces tanashiensis Peptidoglycan Diamino acid Diaminopimelic Acid Biochemistry Microbiology Streptomyces 03 medical and health sciences chemistry.chemical_compound Cell Wall RNA Ribosomal 16S Genetics Molecular Biology Phospholipids Phylogeny Soil Microbiology Streptomyces gulbargensis Streptomyces nashvillensis Base Composition biology Strain (chemistry) Fatty Acids Sequence Analysis DNA General Medicine biology.organism_classification Bacterial Typing Techniques Actinobacteria 030104 developmental biology chemistry Streptomyces roseolus Diaminopimelic acid |
| Zdroj: | Archives of Microbiology. 198:785-791 |
| ISSN: | 1432-072X 0302-8933 |
| DOI: | 10.1007/s00203-016-1234-4 |
| Popis: | A novel actinobacterial strain, designated LPA192(T), was isolated from a soil sample collected from Lop Nur, Xinjiang Uygur Autonomous Region, Northwest China. A polyphasic approach was used to investigate the taxonomic position of strain LPA192(T). The isolate showed morphological and chemotaxonomic characteristics typical of members of the genus Streptomyces. Peptidoglycan was found to contain LL-diaminopimelic acid as the diagnostic diamino acid. The predominant menaquinones were MK-9(H6) and MK-10(H4). Polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylinositol. Major cellular fatty acids consist of C16:0, anteiso-C15:0 and C18:1 ω9c. The sugar in whole-cell hydrolysates was mannose. Phylogenetic analysis indicated that strain LPA192(T) is closely related to Streptomyces tanashiensis LMG 20274(T) (99.3 %), Streptomyces gulbargensis DAS131(T) (99.3 %), Streptomyces nashvillensis NBRC 13064(T) (99.3 %), Streptomyces roseolus NBRC 12816(T) (99.2 %) and Streptomyces filamentosus NBRC 12767(T) (99.1 %) while showing below 98.5 % sequencing similarities with other validly published Streptomyces species. However, DNA-DNA relatedness values between LPA192(T) and the closely related type strains were below 40 %, which are much lower than 70 % threshold value for species delineation. The genomic DNA G + C content of strain LPA192(T) was 69.3 mol %. Based on the differences in genotypic and phenotypic characteristics from the closely related strains, strain LPA192(T) is considered to represent a novel species of the genus Streptomyces for which the name Streptomyces xinjiangensis sp. nov. is proposed. The type strain is LPA192(T) (=KCTC 39601(T) = CGMCC 4.7288(T)). |
| Databáze: | OpenAIRE |
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