Stereospecificity and PAX6 function direct Hoxd4 neural enhancer activity along the antero-posterior axis

Autor: Richard L. Maas, Angel Amores, Christof Nolte, Yi-Lin Yan, Erzsébet Nagy Kovács, Isabel Rambaldi, Maxime Bouchard, Mark Featherstone, Feng Zhang, David Grote, Sheldon Rowan, John H. Postlethwait, Mojgan Rastegar
Rok vydání: 2006
Předmět:
Central Nervous System
Hoxd4
PAX6 Transcription Factor
Mouse
Receptors
Retinoic Acid

Retinoic acid
Regulatory Sequences
Nucleic Acid

Transgenic
Mice
chemistry.chemical_compound
0302 clinical medicine
RARE
Paired Box Transcription Factors
Hox gene
Zebrafish
Border
Conserved Sequence
0303 health sciences
Phylogenetic footprint
Gene Expression Regulation
Developmental

Stereoisomerism
Enhancer Elements
Genetic

medicine.anatomical_structure
Neural enhancer
Transcription
Hoxd4a
animal structures
Evolution
Molecular Sequence Data
Rhombomere
Conservation
Biology
Embryonic patterning
Cell Line
03 medical and health sciences
medicine
Animals
Eye Proteins
Enhancer
Molecular Biology
Body Patterning
030304 developmental biology
Homeodomain Proteins
Anterior
Base Sequence
Neural tube
Antero-posterior
Cell Biology
biology.organism_classification
Hindbrain
Molecular biology
Pax6
Repressor Proteins
Rhombencephalon
chemistry
Dorso-ventral
Mutation
Stereospecificity
PAX6
Knockdown
Chromatin immunoprecipitation
030217 neurology & neurosurgery
Transcription Factors
Developmental Biology
Zdroj: Developmental Biology. 299(2):582-593
ISSN: 0012-1606
DOI: 10.1016/j.ydbio.2006.08.061
Popis: The antero-posterior (AP) and dorso-ventral (DV) patterning of the neural tube is controlled in part by HOX and PAX transcription factors, respectively. We have reported on a neural enhancer of Hoxd4 that directs expression in the CNS with the correct anterior border in the hindbrain. Comparison to the orthologous enhancer of zebrafish revealed seven conserved footprints including an obligatory retinoic acid response element (RARE), and adjacent sites D, E and F. Whereas enhancer function in the embryonic CNS is destroyed by separation of the RARE from sites D–E–F by a half turn of DNA, it is rescued by one full turn, suggesting stereospecific constraints between DNA-bound retinoid receptors and the factor(s) recognizing sites D–E–F. Alterations in the DV trajectory of the Hoxd4 anterior expression border following mutation of site D or E implicated transcriptional regulators active across the DV axis. We show that PAX6 specifically binds sites D and E in vitro, and use chromatin immunoprecipitation to demonstrate recruitment of PAX6 to the Hoxd4 neural enhancer in mouse embryos. Hoxd4 expression throughout the CNS is reduced in Pax6 mutant SeyNeu animals on embryonic day 8. Additionally, stage-matched zebrafish embryos having decreased pax6a and/or pax6b activity display malformed rhombomere boundaries and an anteriorized hoxd4a expression border. These results reveal an evolutionarily conserved role for Pax6 in AP-restricted expression of vertebrate Hoxd4 orthologs.
Databáze: OpenAIRE