The effect of heat stress on frame switch splicing of X-box binding protein 1 gene in horse
| Autor: | Tae Sub Park, Byung-Wook Cho, Saichit Khummuang, Seong-Keun Cho, Hyun-Hee Youn, Jae-Young Choi, Teak-Soon Shin, Byeong-Woo Kim, Hyo Gun Lee, Myunghoo Kim, Jakyeom Seo, Jeong-Woong Park |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2019 |
| Předmět: |
Messenger RNA
Heat Stress XBP1 X-box Binding Protein 1 Chemistry lcsh:Animal biochemistry Promoter Thoroughbred Animal Breeding and Genetics X-Box Binding Protein 1 Article Cell biology Quantitative Real-time Polymerase Chain Reaction (qRT-PCR) Regulatory sequence RNA splicing Unfolded protein response Animal Science and Zoology lcsh:Animal culture Gene lcsh:QP501-801 Food Science lcsh:SF1-1100 |
| Zdroj: | Asian-Australasian Journal of Animal Sciences Asian-Australasian Journal of Animal Sciences, Vol 32, Iss 8, Pp 1095-1103 (2019) |
| ISSN: | 1976-5517 1011-2367 |
| Popis: | Objective Among stress responses, the unfolded protein response (UPR) is a well-known mechanism related to endoplasmic reticulum (ER) stress. ER stress is induced by a variety of external and environmental factors such as starvation, ischemia, hypoxia, oxidative stress, and heat stress. Inositol requiring enzyme 1α (IRE1α)-X-box protein 1 (XBP1) is the most conserved pathway involved in the UPR and is the main component that mediates IRE1α signalling to downstream ER-associated degradation (ERAD)- or UPR-related genes. XBP1 is a transcription factor synthesised via a novel mechanism called 'frame switch splicing', and this process has not yet been studied in the horse XBP1 gene. Therefore, the aim of this study was to confirm the frame switch splicing of horse XBP1 and characterise its dynamics using Thoroughbred muscle cells exposed to heat stress. Methods Primary horse muscle cells were used to investigate heat stress-induced frame switch splicing of horse XBP1. Frame switch splicing was confirmed by sequencing analysis. XBP1 amino acid sequences and promoter sequences of various species were aligned to confirm the sequence homology and to find conserved cis-acting elements, respectively. The expression of the potential XBP1 downstream genes were analysed by quantitative real-time polymerase chain reaction. Results We confirmed that splicing of horse XBP1 mRNA was affected by the duration of thermal stress. Twenty-six nucleotides in the mRNA of XBP1 were deleted after heat stress. The protein sequence and the cis-regulatory elements on the promoter of horse XBP1 are highly conserved among the mammals. Induction of putative downstream genes of horse XBP1 was dependent on the duration of heat stress. We confirmed that both the mechanisms of XBP1 frame switch splicing and various binding elements found in downstream gene promoters are highly evolutionarily conserved. Conclusion The frame switch splicing of horse XBP1 and its dynamics were highly conserved among species. These results facilitate studies of ER-stress in horse. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|