A SNP-based assay in a non model species : evolutionary lineage assignment of brown trout ancient DNA
| Autor: | Aurélie Manicki, Joëlle Chat |
|---|---|
| Přispěvatelé: | Ecologie Comportementale et Biologie des Populations de Poissons (ECOBIOP), Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA) |
| Jazyk: | angličtina |
| Rok vydání: | 2012 |
| Předmět: |
Mitochondrial DNA
[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT] evolutionary lineage Lineage (evolution) animal diseases salmo trutta Haplogroup Primer extension Brown trout homplasy poisson salmonids Genetics Salmo Ecology Evolution Behavior and Systematics Salmonidae ComputingMilieux_MISCELLANEOUS fish salmonidae sea trout biology snapshot mitochondrial dna GENETIQUE biology.organism_classification multiplex primer extension Ancient DNA truite commune ancient dna [SDE.BE]Environmental Sciences/Biodiversity and Ecology SALMONIDE |
| Zdroj: | Conservation Genetics Resources Conservation Genetics Resources, Springer, 2012, 4 (1), pp.59-62. ⟨10.1007/s12686-011-9474-8⟩ |
| ISSN: | 1877-7252 1877-7260 |
| DOI: | 10.1007/s12686-011-9474-8⟩ |
| Popis: | International audience; A set of 12 single nucleotide polymorphisms selected for both confirming Salmo trutta identity and distinguishing the six European evolutionary lineages were included in a multiplex single-base primer extension assay to confidently assign brown trout ancient DNA to one of the six European haplogroups. The assignment rate reaches 75% for brown trout scales collected 40 years ago |
| Databáze: | OpenAIRE |
| Externí odkaz: |
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