Mameliella atlantica sp. nov., a marine bacterium of the Roseobacter clade isolated from deep-sea sediment of the South Atlantic Ocean
| Autor: | Lijing Jiang, Zongze Shao, Xiang Zeng, Hongxiu Xu, Shaoneng Li |
|---|---|
| Rok vydání: | 2015 |
| Předmět: |
DNA
Bacterial Geologic Sediments Ubiquinone Sequence analysis Molecular Sequence Data Microbiology Genus Phylogenetics RNA Ribosomal 16S Botany Seawater Rhodobacteraceae Atlantic Ocean Phospholipids Phylogeny Ecology Evolution Behavior and Systematics Base Composition Phylogenetic tree biology Strain (chemistry) Fatty Acids Sequence Analysis DNA General Medicine Roseobacter Ribosomal RNA biology.organism_classification 16S ribosomal RNA Bacterial Typing Techniques |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 65:2255-2259 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/ijs.0.000248 |
| Popis: | A taxonomic study was carried out on strain L6M1-5T, which was isolated from deep-sea sediment collected from the South Atlantic Ocean. The isolate was Gram-reaction-negative, oxidase-negative and catalase-weakly positive. Growth was observed in the presence of 0.5–15 % (w/v) NaCl (optimum 3–5 %), at 10–41 °C (optimum 28–30 °C), and pH 5.0–10.5 (optimum pH 7.0). The principal fatty acids were summed feature8 (C18 : 1ω7c/ω6c) (84.2 %), C18 : 0 (6.3 %), C12 : 1 3-OH (3.2 %) and C16 : 0 (2.7 %). The polar lipid profile comprised phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids, two unknown phospholipids and one unknown lipid. Ubiquinone-10 was the major quinone. The G+C content of the genomic DNA was 66.0 mol %. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain L6M1-5T belonged to the genus Mameliella and shared 95.8 % sequence similarity with Mameliella alba JLT354-WT. The combined genotypic and phenotypic data show that strain L6M1-5T represents a novel species of the genus Mameliella, for which the name Mameliella. atlantica sp. nov. is proposed. The type strain is L6M1-5T ( = MCCC 1A07531T = JCM 30230T). |
| Databáze: | OpenAIRE |
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