A double-digitising method for building 3D virtual trees with non-planar leaves: application to the morphology and light-capture properties of young beech trees (Fagus sylvatica)

Autor: Jean-Christophe Chambelland, Hervé Sinoquet, André Marquier, Gabriela Sonohat, Marc Saudreau, Mathieu Dassot, Nicolas Dones, Philippe Balandier, Boris Adam
Přispěvatelé: Laboratoire de Physique et Physiologie Intégratives de l'Arbre Fruitier et Forestier (PIAF), Institut National de la Recherche Agronomique (INRA)-Université Blaise Pascal - Clermont-Ferrand 2 (UBP), Ecosystèmes forestiers (UR EFNO), Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA), Écosystèmes forestiers (UR EFNO), Centre national du machinisme agricole, du génie rural, des eaux et forêts (CEMAGREF)
Jazyk: angličtina
Rok vydání: 2008
Předmět:
0106 biological sciences
Lamina
FORET
IMAGE
Plant Science
01 natural sciences
NUMERISATION ELECTROMAGNETIQUE
ARBRE FORESTIER
PEUPLEMENT FORESTIER
REGENERATION DES ARBRES
[SDV.SA.SF]Life Sciences [q-bio]/Agricultural sciences/Silviculture
forestry

VIRTUAL PLANTS
DIGITALISATION
PLANTE VIRTUELLE
LUMIERE
NUMERISATION TRIDIMENSIONNELLE
ELECTROMAGNETIC DIGITISING
biology
[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]
Horticulture
LASER SCANNER
INTERCEPTION LUMINEUSE
[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]
[SDE]Environmental Sciences
RECONSTRUCTION 3D
Interception
FEUILLE
Morphology (linguistics)
HETRE
MORPHOLOGIE
Curvature
010603 evolutionary biology
FAGUS SYLVATICA
Fagus sylvatica
Botany
HETRE COMMUN
[SDV.BV]Life Sciences [q-bio]/Vegetal Biology
ARCHITECTURE DE L'ARBRE
SCANNER LASER
Beech
[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/Morphogenesis
15. Life on land
[INFO.INFO-NA]Computer Science [cs]/Numerical Analysis [cs.NA]
biology.organism_classification
Tree (graph theory)
Ray
SCANNER
MORPHOLOGY
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
Agronomy and Crop Science
METHODOLOGIE
010606 plant biology & botany
Zdroj: Functional Plant Biology
Functional Plant Biology, CSIRO Publishing, 2008, 35 (10), p. 1059-p. 1069. ⟨10.1071/FP08051⟩
5. International Workshop on Functional Structural Plant Models
5. International Workshop on Functional Structural Plant Models, Nov 2007, Napier, New Zealand. ⟨10.1071/FP08051⟩
5. International Workshop on Functional Structural Plant Models, Nov 2007, Napier, New Zealand
ISSN: 1445-4408
DOI: 10.1071/FP08051⟩
Popis: We developed a double-digitising method combining a hand-held electromagnetic digitizer and a non-contact 3D laser scanner. The former was used to record the positions of all leaves in a tree and the orientation angles of their lamina. The latter served to obtain the morphology of the leaves sampled in the tree. As the scanner outputs a cloud of points, software was developed to reconstruct non-planar (NP) leaves composed of triangles, and to compute numerical shape parameters: midrib curvature, torsion and transversal curvature of the lamina. The combination of both methods allowed construction of 3D virtual trees with NP leaves. The method was applied to young beech trees (Fagus sylvatica L.) from different sunlight environments (from 1 to 100% incident light) in a forest in central France. Leaf morphology responded to light availability, with a more bent shape in well-lit leaves. Light interception at the leaf scale by NP leaves decreased from 4 to 10% for shaded and sunlit leaves compared with planar leaves. At the tree scale, light interception by trees made of NP leaves decreased by 1 to 3% for 100% to 1% light, respectively.
Databáze: OpenAIRE