Whole genomic characterization of Korean porcine G8P[7] reassortant rotaviruses
| Autor: | Mia Madel Alfajaro, Deok-Song Kim, Mun-Il Kang, Jong-Soon Choi, Jun-Gyu Park, Ji-Yun Kim, Ja-Young Seo, Joseph Sang-Il Kwon, Mahmoud Soliman, Eun-Hyo Cho, Yeong-Bin Baek, Sang-Ik Park, Kyoung-Oh Cho, Nam-Il Woo, Jelle Matthijnssens |
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| Rok vydání: | 2016 |
| Předmět: |
Rotavirus
0301 basic medicine Swine Sequence analysis viruses Sequence Homology Genome Viral Biology medicine.disease_cause Genome Rotavirus Infections 03 medical and health sciences Viral genetics Phylogenetics Virology Genotype medicine Animals Cluster Analysis Gene Phylogeny Swine Diseases Genetics Korea Strain (biology) virus diseases Sequence Analysis DNA General Medicine biochemical phenomena metabolism and nutrition 030104 developmental biology RNA Viral Reassortant Viruses |
| Zdroj: | Archives of Virology. 161:2835-2841 |
| ISSN: | 1432-8798 0304-8608 |
| Popis: | This study analyzed eleven genomic segments of three Korean porcine G8P[7] group A rotavirus (RVA) strains. Phylogenetically, these strains contained two bovine-like and nine porcine-like genomic segments. Eight genes (VP1, VP2, VP6 and NSP1-NSP5) of strains 156-1 and 42-1 and seven genes (VP1, VP2, VP6 and NSP2-NSP5) of strain C-1 clustered closely with porcine and porcine-like animal strains and distantly from typical human Wa-like strains. The VP3-M2 genotype of these strains clustered closely with bovine-like strains, but distantly with typical human DS-1-like strains. These data indicate that multiple reassortments involving porcine and bovine RVA strains in Korea must have occurred. ispartof: Archives of Virology vol:161 issue:10 pages:2835-2841 ispartof: location:Austria status: published |
| Databáze: | OpenAIRE |
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