A Short Phosphodiester Window Is Sufficient to Direct RNase H-Dependent RNA Cleavage by Antisense Peptide Nucleic Acid

Autor: Bernard Lebleu, Ian Robbins, Sander Van Der Laan, Jeroen C. Verheijen, Charlotte Malchére, Jacques Van Boom, Lionel Bastide
Přispěvatelé: Centre de Recherches sur les Macromolécules Végétales (CERMAV), Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF), Max-Planck-Institut für Plasmaphysik [Garching] (IPP), Institut de Génétique Moléculaire de Montpellier (IGMM), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)
Rok vydání: 2000
Předmět:
Peptide Nucleic Acids
Polymers
RNase P
Ribonuclease H
Oligonucleotides
Biology
Cleavage (embryo)
01 natural sciences
Catalysis
03 medical and health sciences
chemistry.chemical_compound
Escherichia coli
Genetics
Animals
[SDV.BBM]Life Sciences [q-bio]/Biochemistry
Molecular Biology

RNA
Messenger

RNase H
030304 developmental biology
Pharmacology
Drug Escherichia coli/enzymology Gene Targeting Oligonucleotides/*pharmacology Oligonucleotides
0303 health sciences
Cell-Free System
Dose-Response Relationship
Drug

Peptide nucleic acid
010405 organic chemistry
musculoskeletal
neural
and ocular physiology

Animals Catalysis Cell-Free System DNA/chemistry Dose-Response Relationship
RNA
DNA
Oligonucleotides
Antisense

Messenger/drug effects/*metabolism Rabbits Ribonuclease H/drug effects/genetics/*metabolism
0104 chemical sciences
chemistry
Biochemistry
Antisense/chemistry/*pharmacology Peptide Nucleic Acids/chemistry/*pharmacology Polymers/pharmacology Protein Biosynthesis/drug effects RNA
Protein Biosynthesis
Gene Targeting
biological sciences
Phosphodiester bond
cardiovascular system
biology.protein
Rabbits
RNA Cleavage
tissues
Zdroj: Antisense and Nucleic Acid Drug Development
Antisense and Nucleic Acid Drug Development, Mary Ann Liebert, 2000, 10 (6), pp.463--8. ⟨10.1089/oli.1.2000.10.463⟩
ISSN: 1087-2906
DOI: 10.1089/oli.1.2000.10.463
Popis: The potential pharmacologic benefits of using peptide nucleic acid (PNA) as an antisense agent are tempered by its incapacity to activate RNase H. The mixed backbone oligonucleotide (ON) (or gapmer) approach, in which a short internal window of RNAse H-competent residues is embedded within an RNase H-incompetent ON has not been applied previously to PNA because PNA and DNA hybridize to RNA with very different helical structures, creating structural perturbations at the two PNA-DNA junctions. It is demonstrated here for the first time that a short internal phosphodiester window within a PNA is sufficient to evoke the RNase H-dependent cleavage of a targeted RNA and to abrogate translation elongation in a well-characterized in vitro assay.
Databáze: OpenAIRE