Complete genome sequence of melon yellowing-associated virus from melon plants with the severe yellowing disease in Brazil
| Autor: | Alice K. Inoue-Nagata, Avanor C. da Costa Junior, Thiago M. Costa, Fernando Antonio Souza de Aragão, Tatsuya Nagata, G. P. Andrade, Miguel A. Aranda, Rosana Blawid, Mirtes Freitas Lima, Gilvan Pio-Ribeiro |
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| Rok vydání: | 2017 |
| Předmět: |
0301 basic medicine
Carlavirus Melon Sequence Homology Genome Viral Genome Virus Open Reading Frames 03 medical and health sciences symbols.namesake Virology Phylogeny Plant Diseases Genetics Sanger sequencing Whole genome sequencing biology Nucleic acid sequence food and beverages Sequence Analysis DNA General Medicine biology.organism_classification Satellite virus Cucurbitaceae 030104 developmental biology Satellite Viruses symbols RNA Viral Brazil |
| Zdroj: | Archives of Virology. 162:3899-3901 |
| ISSN: | 1432-8798 0304-8608 |
| DOI: | 10.1007/s00705-017-3532-9 |
| Popis: | Here, we describe the complete genome sequence of melon yellowing-associated virus (MYaV), found in melon plants with severe yellowing disease, determined by high-throughput and Sanger sequencing. MYaV has an RNA genome of 9073 nucleotides plus a poly(A) tail. At least six open reading frames were predicted, with a typical carlavirus genomic organisation. Phylogenetic analysis of the complete genome sequence and the amino acid sequences of the RNA-dependent RNA polymerase confirmed that MYaV belongs to the genus Carlavirus, with the highest genome-wide nucleotide sequence identity of 59.8% to sweet potato yellow mottle virus. |
| Databáze: | OpenAIRE |
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