Rapid LC–MS Method for Accurate Molecular Weight Determination of Membrane and Hydrophobic Proteins

Autor: Iain D. G. Campuzano, Pascal F. Egea, James E. Keener, Amit Vaish, Michael T. Marty, Joseph A. Loo, Jennifer L. Lippens, Chris Spahr
Rok vydání: 2018
Předmět:
Zdroj: Analytical Chemistry. 90:13616-13623
ISSN: 1520-6882
0003-2700
Popis: Therapeutic target characterization involves many components, including accurate molecular weight (MW) determination. Knowledge of the accurate MW allows one to detect the presence of post-translational modifications, proteolytic cleavages, and importantly, if the correct construct has been generated and purified. Denaturing liquid chromatography-mass spectrometry (LC-MS) can be an attractive method for obtaining this information. However, membrane protein LC-MS methodology has remained relatively under-explored and under-incorporated in comparison to methods for soluble proteins. Here, systematic investigation of multiple gradients and column chemistries has led to development of a 5-minute denaturing LC-MS method for acquiring membrane protein accurate MW measurements. Conditions were interrogated with membrane proteins such as GPCRs and ion channels, as well as bispecific antibody constructs of variable sizes with the aim to provide the community with rapid LC-MS methods necessary to obtain chromatographic and accurate MW measurements in a medium-to high-throughput manner. The 5-minute method detailed has successfully produced MW measurements for hydrophobic proteins with a wide size range (17.5 to 105 kDa) and provided evidence that some constructs indeed contain unexpected modifications or sequence clipping. This rapid LC-MS method is also capable of baseline separating formylated and non-formylated aquaporinZ membrane protein.
Databáze: OpenAIRE