| Autor: |
Ryouka Kawahara-Miki, Tsuda, Kaoru, Yuh Shiwa, Arai-Kichise, Yuko, Matsumoto, Takashi, Kanesaki, Yu, Sen-Ichi Oda, Shizufumi Ebihara, Yajima, Shunsuke, Yoshikawa, Hirofumi, Kono, Tomohiro |
| Rok vydání: |
2020 |
| Předmět: |
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| DOI: |
10.6084/m9.figshare.12879812 |
| Popis: |
Additional file 9:The number of SNPs and indels with various filters. Detected SNPs and indels were filtered with additional filters and the number of homozygous and heterozygous SNPs and indels was compared. Parameters for the filters were (1) Depth: the number of reads mapped to the SNP sites, (2) SNPs: the number of reads calling SNP at the SNP site, and (3) Mutation: the cutoff value of percent aligned reads calling the SNP per total mapped reads at the SNP sites. Cut off value was 30% in all filters. In the table, "%" means the reduced percentage of the number of SNPs/indels compared with basic parameters (i.e., Depth≥ 3, SNPs≥ 2, and Mutation≥ 30). (PDF 63 KB) |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
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