Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome
| Autor: | Akifumi Sugiyama, Efraín De Luna, Hideya Fukuzawa, Yuki Hirakawa, Yoshihiro Yoshitake, Jeremy Schmutz, Minoru Kubo, Sabine Zachgo, Sumio Sugano, Satoshi Naramoto, Isabel Monte, Juan Caballero-Pérez, Takashi Okamoto, Feng Chen, Keita Kinose, Rui Sun, Bruno Catarino, Shin-ichiro Inoue, Tomokazu Kawashima, Yasukazu Nakamura, Masaaki Umeda, Masayuki Tsuzuki, Junko Kyozuka, John L. Bowman, Mitsuru Kakita, Chia-Wei Lu, Eduardo Flores-Sandoval, Takayuki Kohchi, Christian R. Boehm, Kimitsune Ishizaki, D. Magnus Eklund, Shih-Shun Lin, Makoto Shirakawa, Jim Haseloff, Moritz Rövekamp, Hirofumi Nakagami, Anna Lipzen, Yuichiro Watanabe, Kazuhiko Nishitani, Noriyuki Suetsugu, Keisuke Inoue, Marc W. Schmid, Yosuke Kawai, Hirokazu Tomogane, Robert A. Martienssen, Shengqiang Shu, Ryuichi Nishihama, Ulf Lagercrantz, Miya Mizutani, Liam Dolan, Tom Dierschke, Frédéric Berger, Felix Althoff, Kevin M. Davies, Ueli Grossniklaus, Bence Galik, Asao Fujiyama, Sureshkumar Balasubrmanian, Ryusuke Yokoyama, Takashi Ueda, Izumi Yotsui, Toshinori Kinoshita, Misato Ohtani, Eri Koide, Kazufumi Yazaki, Shinichiro Sawa, Jane Grimwood, Diane Bauer, Mario A. Arteaga-Vazquez, Sakiko Ishida, Takahiro Hamada, Roberto Solano, Alexander J. Hetherington, Daniel Grimanelli, Stevie N. Florent, Erika Lindquist, Ryosuke Sano, Kenji Komatsu, Catherine Adam, Asuka Higo, Sarah Kopischke, Hope Hundley, Rebecca A. Mosher, Jerry Jenkins, Naoki Minamino, Hideki Nagasaki, Mizuki Takenaka, Kerrie Barry, Takashi Araki, Nobuyoshi Mochizuki, Anke Reinders, Mihails Delmans, Yuji Kohara, Yoko Ikeda, Daisuke Takezawa, Mansi Chovatia, Ana E. Dorantes-Acosta, Taku Demura, Masaki Okumura, Qidong Jia, Takehiko Kanazawa, Yutaka Suzuki, Megan Kennedy, Jeremy Phillips, Bernardo Pollak, Liam N. Briginshaw, Shohei Yamaoka, Shota Chiyoda, Alexander Spunde, John M. Ward, Masaharu Mizutani, Katsuyuki T. Yamato, Shiori S Aki |
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| Přispěvatelé: | Boehm, Christian [0000-0002-6633-7998], Haseloff, Jim [0000-0003-4793-8058], Pollak, Bernardo [0000-0003-2329-7401], Apollo - University of Cambridge Repository, Monash University [Clayton], Department of Energy / Joint Genome Institute (DOE), Los Alamos National Laboratory (LANL), Kobe University, Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences (OeAW), Nara Institute of Science and Technology, Monash University [Melbourne], The University of Tennessee [Knoxville], Osnabrück University of Applied Sciences (OS UAS), Hochschule Osnabrück, Diversité, adaptation, développement des plantes (UMR DIADE), Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Department of Earth Science and Astrononomy [Tokyo], The University of Tokyo (UTokyo), National Institute for Basic Biology [Okazaki] (NIBB), Graduate University for Advanced Studies [Hayama] (SOKENDAI), Cold Spring Harbor Laboratory (CSHL), Centro Nacional de Biotecnología [Madrid] (CNB-CSIC), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), RIKEN Center for Sustainable Resource Science [Yokohama] (RIKEN CSRS), RIKEN - Institute of Physical and Chemical Research [Japon] (RIKEN), Max Planck Institute for Plant Breeding Research (MPIPZ), Tokyo Metropolitan University [Tokyo] (TMU), Kumamoto University, Biocomputing Unit [Madrid], Research Institute for Sustainable Humanosphere (RISH), Kyoto University [Kyoto], University of Ulm (UUlm), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Kyoto University |
| Rok vydání: | 2017 |
| Předmět: |
inorganic chemicals
0301 basic medicine Flora Transcription Genetic [SDV]Life Sciences [q-bio] Marchantia polymorpha Adaptation Biological macromolecular substances Genome General Biochemistry Genetics and Molecular Biology Evolutionsbiologi 03 medical and health sciences Gene Expression Regulation Plant Botany Marchantia [SDV.BV]Life Sciences [q-bio]/Vegetal Biology sex chromosome Biological sciences Plant evolution Medical And Health Sciences Evolutionary Biology biology Ecology fungi food and beverages Molecular Sequence Annotation Biological evolution Biological Sciences 15. Life on land biology.organism_classification charophycean algae Biological Evolution 030104 developmental biology Embryophyta Terrestrial ecosystem land plant evolution auxin Genome Plant Developmental Biology Signal Transduction |
| Zdroj: | Cell Cell, Elsevier, 2017, 171 (2), pp.287-304.e15. ⟨10.1016/j.cell.2017.09.030⟩ Cell, 2017, 171 (2), pp.287-304.e15. ⟨10.1016/j.cell.2017.09.030⟩ Bowman, John L; Kohchi, Takayuki; Yamato, Katsuyuki T; Jenkins, Jerry; Shu, Shengqiang; Ishizaki, Kimitsune; et al.(2017). Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. CELL, 171(2), 287-+. doi: 10.1016/j.cell.2017.09.030. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7pr066zj Bowman, J L, Kohchi, T, Yamato, K T, Jenkins, J, Shu, S, Ishizaki, K, Yamaoka, S, Nishihama, R, Nakamura, Y, Berger, F, Adam, C, Aki, S S, Althoff, F, Araki, T, Arteaga-Vazquez, M A, Balasubrmanian, S, Barry, K, Bauer, D, Boehm, C R, Briginshaw, L, Caballero-Perez, J, Catarino, B, Chen, F, Chiyoda, S, Chovatia, M, Davies, K M, Delmans, M, Demura, T, Dierschke, T, Dolan, L, Dorantes-Acosta, A E, Eklund, D M, Florent, S N, Flores-Sandoval, E, Fujiyama, A, Fukuzawa, H, Galik, B, Grimanelli, D, Grimwood, J, Grossniklaus, U, Hamada, T, Haseloff, J, Hetherington, A J, Higo, A, Hirakawa, Y, Hundley, H N, Ikeda, Y, Inoue, K, Inoue, S I, Ishida, S, Jia, Q, Kakita, M, Kanazawa, T, Kawai, Y, Kawashima, T, Kennedy, M, Kinose, K, Kinoshita, T, Kohara, Y, Koide, E, Komatsu, K, Kopischke, S, Kubo, M, Kyozuka, J, Lagercrantz, U, Lin, S S, Lindquist, E, Lipzen, A M, Lu, C W, De Luna, E, Martienssen, R A, Minamino, N, Mizutani, M, Mizutani, M, Mochizuki, N, Monte, I, Mosher, R, Nagasaki, H, Nakagami, H, Naramoto, S, Nishitani, K, Ohtani, M, Okamoto, T, Okumura, M, Phillips, J, Pollak, B, Reinders, A, Rövekamp, M, Sano, R, Sawa, S, Schmid, M W, Shirakawa, M, Solano, R, Spunde, A, Suetsugu, N, Sugano, S, Sugiyama, A, Sun, R, Suzuki, Y, Takenaka, M, Takezawa, D, Tomogane, H, Tsuzuki, M, Ueda, T, Umeda, M, Ward, J M, Watanabe, Y, Yazaki, K, Yokoyama, R, Yoshitake, Y, Yotsui, I, Zachgo, S & Schmutz, J 2017, ' Insights into land plant evolution garnered from the marchantia polymorpha Genome ', Cell, vol. 171, no. 2, pp. 287-304.e15 . https://doi.org/10.1016/j.cell.2017.09.030 |
| ISSN: | 0092-8674 1097-4172 |
| Popis: | The evolution of land flora transformed the terrestrial environment. Land plants evolved from an ancestral charophycean alga from which they inherited developmental, biochemical, and cell biological attributes. Additional biochemical and physiological adaptations to land, and a life cycle with an alternation between multicellular haploid and diploid generations that facilitated efficient dispersal of desiccation tolerant spores, evolved in the ancestral land plant. We analyzed the genome of the liverwort Marchantia polymorpha, a member of a basal land plant lineage. Relative to charophycean algae, land plant genomes are characterized by genes encoding novel biochemical pathways, new phytohormone signaling pathways (notably auxin), expanded repertoires of signaling pathways, and increased diversity in some transcription factor families. Compared with other sequenced land plants, M. polymorpha exhibits low genetic redundancy in most regulatory pathways, with this portion of its genome resembling that predicted for the ancestral land plant. 陸上植物の祖先の特徴をもつ苔類ゼニゴケの全ゲノム構造を解明. 京都大学プレスリリース. 2017-10-06. |
| Databáze: | OpenAIRE |
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