Genome sequence and organization analysis of Heliothis virescens ascovirus 3f isolated from a Helicoverpa zea larva

Autor:	Zi-Shu Chen, Yong-Lu Wei, Guo-Hua Huang, Jue Hu, Shun-Ji Li, Xiao-Wen Cheng
Rok vydání:	2014
Předmět:	Genetics Whole genome sequencing Heliothis virescens Genome Viral Sequence Analysis DNA Biology biology.organism_classification Zea mays Genome United States Open reading frame Ascoviridae Larva GenBank DNA Viral Animals ORFS Gene Ecology Evolution Behavior and Systematics Genomic organization
Zdroj:	Journal of Invertebrate Pathology. 122:40-43
ISSN:	0022-2011
DOI:	10.1016/j.jip.2014.08.003
Popis:	The complete genome sequence of Heliothis virescens ascovirus 3f (HvAV-3f) was obtained. The HvAV-3f genome has a circular genome of 198,157 bp with a G + C content of 46.0%, and encodes 190 open reading frames (ORFs) longer than 69 amino acids. Two major homologous regions ( hrs ) and 29 ‘baculovirus repeat ORFs’ ( bro ) were found in the genome. BLAST analyses revealed that three HvAV-3f genes were homologous to that of lepidopteran insects. Nine ORFs were unique to HvAV-3f, in which two ORFs showed significant levels of similarity to genes that have not been previously described for ascoviruses in the Genbank database.
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d62f13abae325c279c86fd63f5118690 https://doi.org/10.1016/j.jip.2014.08.003 Zobrazit plný text záznamu Full Text from ScienceDirect