Characterization of the structure and interactions of P450 BM3 using hybrid mass spectrometry approaches

Autor: Laura N. Jeffreys, Michael W. Voice, Hazel M. Girvan, Linus O. Johannissen, Andrew W. Munro, Kamila J. Pacholarz, Perdita E. Barran
Jazyk: angličtina
Rok vydání: 2020
Předmět:
0301 basic medicine
Dimer
Crystallography
X-Ray

Biochemistry
Mass Spectrometry
chemistry.chemical_compound
Cytochrome P-450 Enzyme System
structural biology
solution structure
chemistry.chemical_classification
dimerization
native ion mobility mass spectrometry (IM-MS)
biology
Protein dynamics
collision induced unfolding (CIU)
Enzyme structure
enzyme structure
hydrogen-deuterium exchange mass spectrometry (HDX-MS)
protein dynamics
cytochrome P450
Stereochemistry
protein solvent accessibility
enzyme catalysis
Cofactor
Enzyme catalysis
03 medical and health sciences
Bacterial Proteins
Protein Domains
flavoprotein
Manchester Institute of Biotechnology
fusion protein
mass spectrometry (MS)
monooxygenase
Protein Structure
Quaternary

Molecular Biology
NADPH-Ferrihemoprotein Reductase
cytochrome P450 BM3
030102 biochemistry & molecular biology
Deuterium Exchange Measurement
Cell Biology
ResearchInstitutes_Networks_Beacons/manchester_institute_of_biotechnology
Fusion protein
030104 developmental biology
Enzyme
Structural biology
chemistry
reductase
domain interactions
Bacillus megaterium
Enzymology
biology.protein
Protein Multimerization
Zdroj: Jeffreys, L N, Pacholarz, K J, Johannissen, L O, Girvan, H M, Barran, P E, Voice, M W & Munro, A W 2020, ' Characterization of the structure and interactions of P450 BM3 using hybrid mass spectrometry approaches ', Journal of Biological Chemistry, vol. 295, no. 22, pp. 7595-7607 . https://doi.org/10.1074/jbc.RA119.011630
The Journal of Biological Chemistry
DOI: 10.1074/jbc.RA119.011630
Popis: The cytochrome P450 monooxygenase P450 BM3 (BM3) is a biotechnologically important and versatile enzyme capable of producing important compounds such as the medical drugs pravastatin and artemether, and the steroid hormone testosterone. BM3 is a natural fusion enzyme comprising two major domains: a cytochrome P450 (heme-binding) catalytic domain and a NADPH-cytochrome P450 reductase (CPR) domain containing FAD and FMN cofactors in distinct domains of the CPR. A crystal structure of full-length BM3 enzyme is not available in its monomeric or catalytically active dimeric state. In this study, we provide detailed insights into the protein-protein interactions that occur between domains in the BM3 enzyme and characterize molecular interactions within the BM3 dimer by using several hybrid mass spectrometry (MS) techniques, namely native ion mobility MS (IM-MS), collision-induced unfolding (CIU), and hydrogen-deuterium exchange MS (HDX-MS). These methods enable us to probe the structure, stoichiometry, and domain interactions in the ∼240 kDa BM3 dimeric complex. We obtained high-sequence coverage (88–99%) in the HDX-MS experiments for full-length BM3 and its component domains in both the ligand-free and ligand-bound states. We identified important protein interaction sites, in addition to sites corresponding to heme-CPR domain interactions at the dimeric interface. These findings bring us closer to understanding the structure and catalytic mechanism of P450 BM3.
Databáze: OpenAIRE