Multiple groups of novel retroviral genomes in pigs and related species
| Autor: | Melanie E. Goward, Yasuhiro Takeuchi, Walid Heneine, David J. Griffiths, William M. Switzer, Clive Patience, Jonathan P. Stoye, Robin A. Weiss |
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| Rok vydání: | 2001 |
| Předmět: |
Swine
Immunology Molecular Sequence Data Endogenous retrovirus Genome Viral Microbiology Genome Polymerase Chain Reaction law.invention Retrovirus law Suidae Virology Animals Polymerase chain reaction Genetics biology Phylogenetic tree Endogenous Retroviruses biology.organism_classification Stop codon Open reading frame Insect Science DNA Viral RNA Viral Recombination and Evolution |
| Zdroj: | Journal of virology. 75(6) |
| ISSN: | 0022-538X |
| Popis: | In view of the concern over potential infection hazards in the use of porcine tissues and organs for xenotransplantation to humans, we investigated the diversity of porcine endogenous retrovirus (PERV) genomes in the DNA of domestic pigs and related species. In addition to the three known envelope subgroups of infectious gamma retroviruses (PERV-A, -B, and -C), classed together here as PERV group γ1, four novel groups of gamma retrovirus (γ2 to γ5) and four novel groups of beta retrovirus (β1 to β4) genomes were detected in pig DNA using generic and specific PCR primers. PCR quantification indicated that the retroviral genome copy number in the Landrace × Duroc F 1 hybrid pig ranged from 2 (β2 and γ5) to approximately 50 (γ1). The γ1, γ2, and β4 genomes were transcribed into RNA in adult kidney tissue. Apart from γ1, the retroviral genomes are not known to be infectious, and sequencing of a small number of amplified genome fragments revealed stop codons in putative open reading frames in several cases. Analysis of DNA from wild boar and other species of Old World pigs ( Suidae ) and New World peccaries ( Tayassuidae ) showed that one retrovirus group, β2, was common to all species tested, while the others were present among all Old World species but absent from New World species. The PERV-C subgroup of γ1 genomes segregated among domestic pigs and were absent from two African species (red river hog and warthog). Thus domestic swine and their phylogenetic relatives harbor multiple groups of hitherto undescribed PERV genomes. |
| Databáze: | OpenAIRE |
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