ISG20L2, a novel vertebrate nucleolar exoribonuclease involved in ribosome biogenesis

Autor: Régis Dieckmann, Jean-Charles Sanchez, Laurent Bezin, Jean-Jacques Diaz, Karine Kindbeiter, Laurent Duret, Yohann Couté, Stephane Belin
Přispěvatelé: Centre de génétique et de physiologie moléculaire et cellulaire (CGPhiMC), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon, Biomedical Proteomics Research Group (BPRG), Centre médical universitaire, Idéalp' Pharma, Idealp, Bioinformatique, phylogénie et génomique évolutive (BPGE), Département PEGASE [LBBE] (PEGASE), Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS), Physiologie intégrative, cellulaire et moléculaire (PICM), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)
Jazyk: angličtina
Rok vydání: 2008
Předmět:
Exosome complex
Nucleolus
Exodeoxyribonucleases/chemistry/metabolism
Ribosome biogenesis
Biochemistry
Analytical Chemistry
Substrate Specificity
Mutant Proteins/metabolism
0302 clinical medicine
Exoribonuclease
Large ribosomal subunit
RNA Precursors
RNA Precursors/metabolism
Phylogeny
Genetics
0303 health sciences
Cell biology
Protein Transport
030220 oncology & carcinogenesis
Vertebrates
Saccharomyces cerevisiae Proteins/genetics
Ribosomal Proteins/metabolism
Recombinant Fusion Proteins/metabolism
Exoribonuclease activity
Cell Nucleolus
Protein Binding
Ribosomal Proteins
[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]
Saccharomyces cerevisiae Proteins
Recombinant Fusion Proteins
Molecular Sequence Data
Biology
03 medical and health sciences
Animals
Humans
Immunoprecipitation
Amino Acid Sequence
Gene Silencing
Ribosomes/metabolism
ddc:576
Molecular Biology
030304 developmental biology
Computational Biology
RNA Ribosomal/metabolism
Cell Nucleolus/enzymology
Ribosomal RNA
Protein Structure
Tertiary

Protein Structure Tertiary
Exodeoxyribonucleases
RNA
Ribosomal

Hela Cells
Mutant Proteins
Ribosomes
Biogenesis
HeLa Cells
Zdroj: Molecular and Cellular Proteomics, Vol. 7, No 3 (2008) pp. 546-559
Molecular and Cellular Proteomics
Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2007, epub ahead of print. ⟨10.1074/mcp.M700510-MCP200⟩
Molecular and Cellular Proteomics, 2008, 7, epub ahead of print. ⟨10.1074/mcp.M700510-MCP200⟩
Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2008, 7, pp.546-559
ISSN: 1535-9476
1535-9484
DOI: 10.1074/mcp.M700510-MCP200⟩
Popis: International audience; Proteomic analyses of human nucleoli provided molecular bases for an understanding of the multiple functions fulfilled by these nuclear domains. However, the biological roles of about 100 of the identified proteins are unpredictable. The present article describes the functional characterization of one of these proteins, ISG20L2. We demonstrate that ISG20L2 is a 3' to 5' exoribonuclease involved in ribosome biogenesis at the level of 5.8S rRNA maturation, more specifically in the processing of the 12S pre-rRNA. The use of truncated forms of ISG20L2 demonstrated that its N-terminal half promotes the nucleolar localization and suggested that its C-terminal half bears the exoribonuclease activity. Identification of the binding partners of ISG20L2 confirms its involvement in the biogenesis of the large ribosomal subunit. These results strongly support the notion that, in human, as it was demonstrated in yeast, 5.8S rRNA maturation requires several proteins in addition to the exosome complex. Furthermore, this observation sustains greatly the idea that the extremely conserved need for correctly processed rRNAs in vertebrates and yeast are achieved by close but different mechanisms.
Databáze: OpenAIRE